RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
PTCHD1-201ENST00000379361 MT1MQ8N339 61 aa3.38□□□□□ -1.87
PTCHD1-201ENST00000379361 KRTAP4-7Q9BYR0 210 aa3.38□□□□□ -1.87
PTCHD1-201ENST00000379361 KRTAP17-1Q9BYP8 105 aa3.34□□□□□ -1.87
PTCHD1-201ENST00000379361 KRTAP19-6Q3LI70 58 aa3.26□□□□□ -1.89
PTCHD1-201ENST00000379361 RNF213Q63HN8 5207 aa3.26□□□□□ -1.89
PTCHD1-201ENST00000379361 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
PTCHD1-201ENST00000379361 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
PTCHD1-201ENST00000379361 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
PTCHD1-201ENST00000379361 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
PTCHD1-201ENST00000379361 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
PTCHD1-201ENST00000379361 KRTAP9-6A0A140TA67 174 aa3.25□□□□□ -1.89
PTCHD1-201ENST00000379361 MT1AP04731 61 aa3.2□□□□□ -1.9
PTCHD1-201ENST00000379361 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
PTCHD1-201ENST00000379361 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.9
PTCHD1-201ENST00000379361 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
PTCHD1-201ENST00000379361 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
PTCHD1-201ENST00000379361 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
PTCHD1-201ENST00000379361 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
PTCHD1-201ENST00000379361 KIAA1109Q2LD37 5005 aa3.11□□□□□ -1.91
PTCHD1-201ENST00000379361 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
PTCHD1-201ENST00000379361 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
PTCHD1-201ENST00000379361 UBR4Q5T4S7 5183 aa3.05□□□□□ -1.92
PTCHD1-201ENST00000379361 KRTAP9-7A8MTY7 169 aa3.05□□□□□ -1.92
PTCHD1-201ENST00000379361 KRTAP19-2Q3LHN2 52 aa3.04□□□□□ -1.92
PTCHD1-201ENST00000379361 FAT4Q6V0I7 4981 aa3.02□□□□□ -1.93
PTCHD1-201ENST00000379361 ABCA13Q86UQ4 5058 aa3.01□□□□□ -1.93
PTCHD1-201ENST00000379361 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
PTCHD1-201ENST00000379361 KRTAP6-3Q3LI67 103 aa2.97□□□□□ -1.93
PTCHD1-201ENST00000379361 FSIP2Q5CZC0 6907 aa2.96□□□□□ -1.93
PTCHD1-201ENST00000379361 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
PTCHD1-201ENST00000379361 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
PTCHD1-201ENST00000379361 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
PTCHD1-201ENST00000379361 KRTAP19-7Q3SYF9 63 aa2.91□□□□□ -1.94
PTCHD1-201ENST00000379361 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.85□□□□□ -1.95
PTCHD1-201ENST00000379361 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
PTCHD1-201ENST00000379361 MUC2Q02817 5179 aa2.83□□□□□ -1.96
PTCHD1-201ENST00000379361 LCE2AQ5TA79 106 aaPredicted RBP2.82□□□□□ -1.96
PTCHD1-201ENST00000379361 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
PTCHD1-201ENST00000379361 MUC12Q9UKN1 5478 aa2.76□□□□□ -1.97
PTCHD1-201ENST00000379361 KMT2DO14686 5537 aa2.75□□□□□ -1.97
PTCHD1-201ENST00000379361 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
PTCHD1-201ENST00000379361 USH2AO75445 5202 aa2.67□□□□□ -1.98
PTCHD1-201ENST00000379361 FCGBPQ9Y6R7 5405 aaPredicted RBP2.67□□□□□ -1.98
PTCHD1-201ENST00000379361 DSTQ03001 7570 aaKnown RBP2.65□□□□□ -1.98
PTCHD1-201ENST00000379361 NEBP20929 6669 aa2.64□□□□□ -1.99
PTCHD1-201ENST00000379361 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
PTCHD1-201ENST00000379361 SYNE1Q8NF91 8797 aaKnown RBP2.6□□□□□ -1.99
PTCHD1-201ENST00000379361 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
PTCHD1-201ENST00000379361 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
PTCHD1-201ENST00000379361 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
PTCHD1-201ENST00000379361 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
PTCHD1-201ENST00000379361 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
PTCHD1-201ENST00000379361 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
PTCHD1-201ENST00000379361 KRTAP4-6Q9BYQ5 205 aa2.3□□□□□ -2.04
PTCHD1-201ENST00000379361 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
PTCHD1-201ENST00000379361 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
PTCHD1-201ENST00000379361 KRTAP5-9P26371 169 aa2.26□□□□□ -2.05
PTCHD1-201ENST00000379361 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
PTCHD1-201ENST00000379361 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
PTCHD1-201ENST00000379361 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
PTCHD1-201ENST00000379361 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
PTCHD1-201ENST00000379361 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
PTCHD1-201ENST00000379361 KRTAP5-3Q6L8H2 238 aa1.92□□□□□ -2.1
PTCHD1-201ENST00000379361 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
PTCHD1-201ENST00000379361 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
PTCHD1-201ENST00000379361 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
PTCHD1-201ENST00000379361 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
PTCHD1-201ENST00000379361 KRTAP5-10Q6L8G5 202 aa1.6□□□□□ -2.15
PTCHD1-201ENST00000379361 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
PTCHD1-201ENST00000379361 KRTAP5-11Q6L8G4 156 aa1.49□□□□□ -2.17
PTCHD1-201ENST00000379361 KRTAP5-1Q6L8H4 278 aa1.44□□□□□ -2.18
PTCHD1-201ENST00000379361 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
PTCHD1-201ENST00000379361 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
PTCHD1-201ENST00000379361 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
PTCHD1-201ENST00000379361 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.17□□□□□ -2.22
PTCHD1-201ENST00000379361 KRTAP5-7Q6L8G8 165 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 53.2 ms