RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 LPAP08519 4548 aa3.07□□□□□ -1.92
ITM2B-202ENST00000378565 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
ITM2B-202ENST00000378565 LCE5AQ5TCM9 118 aa3.06□□□□□ -1.92
ITM2B-202ENST00000378565 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
ITM2B-202ENST00000378565 KMT2CQ8NEZ4 4911 aaKnown RBP3.06□□□□□ -1.92
ITM2B-202ENST00000378565 PCLOQ9Y6V0 5065 aa3.01□□□□□ -1.93
ITM2B-202ENST00000378565 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
ITM2B-202ENST00000378565 KRTAP9-2Q9BYQ4 174 aa2.97□□□□□ -1.93
ITM2B-202ENST00000378565 SYNE2Q8WXH0 6885 aaKnown RBP2.96□□□□□ -1.93
ITM2B-202ENST00000378565 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
ITM2B-202ENST00000378565 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
ITM2B-202ENST00000378565 KRTAP2-2Q9BYT5 123 aa2.89□□□□□ -1.95
ITM2B-202ENST00000378565 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
ITM2B-202ENST00000378565 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
ITM2B-202ENST00000378565 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
ITM2B-202ENST00000378565 LCE1AQ5T7P2 110 aa2.89□□□□□ -1.95
ITM2B-202ENST00000378565 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
ITM2B-202ENST00000378565 BIRC6Q9NR09 4857 aa2.86□□□□□ -1.95
ITM2B-202ENST00000378565 SYNE1Q8NF91 8797 aaKnown RBP2.85□□□□□ -1.95
ITM2B-202ENST00000378565 HERC2O95714 4834 aa2.82□□□□□ -1.96
ITM2B-202ENST00000378565 HERC1Q15751 4861 aa2.8□□□□□ -1.96
ITM2B-202ENST00000378565 RYR2Q92736 4967 aa2.73□□□□□ -1.97
ITM2B-202ENST00000378565 LCE4AQ5TA78 99 aa2.73□□□□□ -1.97
ITM2B-202ENST00000378565 HYDINQ4G0P3 5121 aa2.73□□□□□ -1.97
ITM2B-202ENST00000378565 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
ITM2B-202ENST00000378565 KIAA1109Q2LD37 5005 aa2.65□□□□□ -1.99
ITM2B-202ENST00000378565 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
ITM2B-202ENST00000378565 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
ITM2B-202ENST00000378565 LCE2AQ5TA79 106 aaPredicted RBP2.6□□□□□ -1.99
ITM2B-202ENST00000378565 HMCN2Q8NDA2 5059 aa2.59□□□□□ -1.99
ITM2B-202ENST00000378565 KRTAP9-6A0A140TA67 174 aa2.59□□□□□ -1.99
ITM2B-202ENST00000378565 EPPK1P58107 5090 aaKnown RBP2.57□□□□□ -2
ITM2B-202ENST00000378565 MUC2Q02817 5179 aa2.52□□□□□ -2.01
ITM2B-202ENST00000378565 KRTAP9-9Q9BYP9 154 aa2.51□□□□□ -2.01
ITM2B-202ENST00000378565 UBR4Q5T4S7 5183 aa2.47□□□□□ -2.01
ITM2B-202ENST00000378565 FSIP2Q5CZC0 6907 aa2.44□□□□□ -2.02
ITM2B-202ENST00000378565 RNF213Q63HN8 5207 aa2.43□□□□□ -2.02
ITM2B-202ENST00000378565 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.36□□□□□ -2.03
ITM2B-202ENST00000378565 ABCA13Q86UQ4 5058 aa2.35□□□□□ -2.03
ITM2B-202ENST00000378565 FAT4Q6V0I7 4981 aa2.33□□□□□ -2.04
ITM2B-202ENST00000378565 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
ITM2B-202ENST00000378565 KMT2DO14686 5537 aa2.29□□□□□ -2.04
ITM2B-202ENST00000378565 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
ITM2B-202ENST00000378565 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
ITM2B-202ENST00000378565 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
ITM2B-202ENST00000378565 FCGBPQ9Y6R7 5405 aaPredicted RBP2.25□□□□□ -2.05
ITM2B-202ENST00000378565 KRTAP4-6Q9BYQ5 205 aa2.21□□□□□ -2.06
ITM2B-202ENST00000378565 KRTAP5-9P26371 169 aa2.13□□□□□ -2.07
ITM2B-202ENST00000378565 USH2AO75445 5202 aa2.12□□□□□ -2.07
ITM2B-202ENST00000378565 DSTQ03001 7570 aaKnown RBP2.11□□□□□ -2.07
ITM2B-202ENST00000378565 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
ITM2B-202ENST00000378565 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
ITM2B-202ENST00000378565 KRTAP5-4Q6L8H1 288 aa2.03□□□□□ -2.09
ITM2B-202ENST00000378565 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
ITM2B-202ENST00000378565 MDN1Q9NU22 5596 aa2.01□□□□□ -2.09
ITM2B-202ENST00000378565 NEBP20929 6669 aa1.96□□□□□ -2.1
ITM2B-202ENST00000378565 MACF1Q9UPN3 7388 aaKnown RBP1.94□□□□□ -2.1
ITM2B-202ENST00000378565 SSPOA2VEC9 5147 aa1.9□□□□□ -2.11
ITM2B-202ENST00000378565 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
ITM2B-202ENST00000378565 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.13
ITM2B-202ENST00000378565 KRTAP5-3Q6L8H2 238 aa1.76□□□□□ -2.13
ITM2B-202ENST00000378565 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
ITM2B-202ENST00000378565 MUC5ACP98088 5654 aa1.68□□□□□ -2.14
ITM2B-202ENST00000378565 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.15
ITM2B-202ENST00000378565 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
ITM2B-202ENST00000378565 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
ITM2B-202ENST00000378565 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
ITM2B-202ENST00000378565 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
ITM2B-202ENST00000378565 KRTAP5-8O75690 187 aa1.5□□□□□ -2.17
ITM2B-202ENST00000378565 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
ITM2B-202ENST00000378565 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
ITM2B-202ENST00000378565 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
ITM2B-202ENST00000378565 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
ITM2B-202ENST00000378565 AHNAK2Q8IVF2 5795 aa1.3□□□□□ -2.2
ITM2B-202ENST00000378565 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.25□□□□□ -2.21
ITM2B-202ENST00000378565 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
ITM2B-202ENST00000378565 KRTAP5-7Q6L8G8 165 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 7.1 ms