RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 KRTAP19-6Q3LI70 58 aa5.62□□□□□ -1.51
CNTNAP3-204ENST00000377656 LCE2DQ5TA82 110 aaPredicted RBP5.61□□□□□ -1.51
CNTNAP3-204ENST00000377656 MT1MQ8N339 61 aa5.61□□□□□ -1.51
CNTNAP3-204ENST00000377656 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
CNTNAP3-204ENST00000377656 FAT4Q6V0I7 4981 aa5.52□□□□□ -1.53
CNTNAP3-204ENST00000377656 RNF213Q63HN8 5207 aa5.52□□□□□ -1.53
CNTNAP3-204ENST00000377656 MT3P25713 68 aa5.51□□□□□ -1.53
CNTNAP3-204ENST00000377656 HMCN2Q8NDA2 5059 aa5.49□□□□□ -1.53
CNTNAP3-204ENST00000377656 KRTAP9-6A0A140TA67 174 aa5.45□□□□□ -1.54
CNTNAP3-204ENST00000377656 LOC100996750A0A140TA64 210 aa5.42□□□□□ -1.54
CNTNAP3-204ENST00000377656 MT4P47944 62 aa5.41□□□□□ -1.54
CNTNAP3-204ENST00000377656 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
CNTNAP3-204ENST00000377656 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
CNTNAP3-204ENST00000377656 MUC2Q02817 5179 aa5.34□□□□□ -1.55
CNTNAP3-204ENST00000377656 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
CNTNAP3-204ENST00000377656 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
CNTNAP3-204ENST00000377656 KRTAP2-1Q9BYU5 128 aa5.28□□□□□ -1.56
CNTNAP3-204ENST00000377656 PRM1P04553 51 aa5.25□□□□□ -1.57
CNTNAP3-204ENST00000377656 MT1AP04731 61 aa5.22□□□□□ -1.57
CNTNAP3-204ENST00000377656 OBSCNQ5VST9 7968 aa5.21□□□□□ -1.58
CNTNAP3-204ENST00000377656 LCE1BQ5T7P3 118 aa5.2□□□□□ -1.58
CNTNAP3-204ENST00000377656 LCE1DQ5T752 114 aa5.2□□□□□ -1.58
CNTNAP3-204ENST00000377656 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
CNTNAP3-204ENST00000377656 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
CNTNAP3-204ENST00000377656 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
CNTNAP3-204ENST00000377656 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
CNTNAP3-204ENST00000377656 LCE1AQ5T7P2 110 aa5.03□□□□□ -1.6
CNTNAP3-204ENST00000377656 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
CNTNAP3-204ENST00000377656 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
CNTNAP3-204ENST00000377656 KRTAP6-3Q3LI67 103 aa4.99□□□□□ -1.61
CNTNAP3-204ENST00000377656 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
CNTNAP3-204ENST00000377656 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
CNTNAP3-204ENST00000377656 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
CNTNAP3-204ENST00000377656 DSTQ03001 7570 aaKnown RBP4.87□□□□□ -1.63
CNTNAP3-204ENST00000377656 USH2AO75445 5202 aa4.85□□□□□ -1.63
CNTNAP3-204ENST00000377656 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
CNTNAP3-204ENST00000377656 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
CNTNAP3-204ENST00000377656 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
CNTNAP3-204ENST00000377656 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
CNTNAP3-204ENST00000377656 KMT2DO14686 5537 aa4.69□□□□□ -1.66
CNTNAP3-204ENST00000377656 MACF1Q9UPN3 7388 aaKnown RBP4.62□□□□□ -1.67
CNTNAP3-204ENST00000377656 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
CNTNAP3-204ENST00000377656 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
CNTNAP3-204ENST00000377656 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
CNTNAP3-204ENST00000377656 LCE1FQ5T754 118 aa4.39□□□□□ -1.71
CNTNAP3-204ENST00000377656 NEBP20929 6669 aa4.33□□□□□ -1.72
CNTNAP3-204ENST00000377656 MDN1Q9NU22 5596 aa4.3□□□□□ -1.72
CNTNAP3-204ENST00000377656 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
CNTNAP3-204ENST00000377656 MUC19Q7Z5P9 8384 aa4.28□□□□□ -1.72
CNTNAP3-204ENST00000377656 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
CNTNAP3-204ENST00000377656 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.74
CNTNAP3-204ENST00000377656 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
CNTNAP3-204ENST00000377656 KRTAP4-6Q9BYQ5 205 aa4.04□□□□□ -1.76
CNTNAP3-204ENST00000377656 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
CNTNAP3-204ENST00000377656 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
CNTNAP3-204ENST00000377656 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
CNTNAP3-204ENST00000377656 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
CNTNAP3-204ENST00000377656 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
CNTNAP3-204ENST00000377656 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
CNTNAP3-204ENST00000377656 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
CNTNAP3-204ENST00000377656 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
CNTNAP3-204ENST00000377656 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
CNTNAP3-204ENST00000377656 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
CNTNAP3-204ENST00000377656 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
CNTNAP3-204ENST00000377656 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
CNTNAP3-204ENST00000377656 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
CNTNAP3-204ENST00000377656 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
CNTNAP3-204ENST00000377656 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
CNTNAP3-204ENST00000377656 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
CNTNAP3-204ENST00000377656 PHGR1C9JFL3 82 aa2.65□□□□□ -1.98
CNTNAP3-204ENST00000377656 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
CNTNAP3-204ENST00000377656 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
CNTNAP3-204ENST00000377656 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
CNTNAP3-204ENST00000377656 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
CNTNAP3-204ENST00000377656 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
CNTNAP3-204ENST00000377656 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
CNTNAP3-204ENST00000377656 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms