RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 KRTAP9-2Q9BYQ4 174 aa5.74□□□□□ -1.49
TBC1D4-201ENST00000377625 HYDINQ4G0P3 5121 aa5.74□□□□□ -1.49
TBC1D4-201ENST00000377625 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
TBC1D4-201ENST00000377625 FLGP20930 4061 aaPredicted RBP5.67□□□□□ -1.5
TBC1D4-201ENST00000377625 MUC17Q685J3 4493 aa5.67□□□□□ -1.5
TBC1D4-201ENST00000377625 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
TBC1D4-201ENST00000377625 TNXBP22105 4242 aa5.57□□□□□ -1.52
TBC1D4-201ENST00000377625 ABCA13Q86UQ4 5058 aa5.55□□□□□ -1.52
TBC1D4-201ENST00000377625 MT1AP04731 61 aa5.52□□□□□ -1.53
TBC1D4-201ENST00000377625 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
TBC1D4-201ENST00000377625 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
TBC1D4-201ENST00000377625 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
TBC1D4-201ENST00000377625 LCE2AQ5TA79 106 aaPredicted RBP5.42□□□□□ -1.54
TBC1D4-201ENST00000377625 KRTAP2-3P0C7H8 128 aa5.4□□□□□ -1.54
TBC1D4-201ENST00000377625 KRTAP2-4Q9BYR9 128 aa5.4□□□□□ -1.54
TBC1D4-201ENST00000377625 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.54
TBC1D4-201ENST00000377625 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
TBC1D4-201ENST00000377625 FSIP2Q5CZC0 6907 aa5.36□□□□□ -1.55
TBC1D4-201ENST00000377625 RNF213Q63HN8 5207 aa5.35□□□□□ -1.55
TBC1D4-201ENST00000377625 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
TBC1D4-201ENST00000377625 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
TBC1D4-201ENST00000377625 UBR4Q5T4S7 5183 aa5.29□□□□□ -1.56
TBC1D4-201ENST00000377625 HMCN2Q8NDA2 5059 aa5.23□□□□□ -1.57
TBC1D4-201ENST00000377625 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
TBC1D4-201ENST00000377625 MUC2Q02817 5179 aa5.21□□□□□ -1.57
TBC1D4-201ENST00000377625 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
TBC1D4-201ENST00000377625 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
TBC1D4-201ENST00000377625 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.59
TBC1D4-201ENST00000377625 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.59
TBC1D4-201ENST00000377625 KRTAP6-3Q3LI67 103 aa5.12□□□□□ -1.59
TBC1D4-201ENST00000377625 OBSCNQ5VST9 7968 aa5.11□□□□□ -1.59
TBC1D4-201ENST00000377625 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
TBC1D4-201ENST00000377625 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
TBC1D4-201ENST00000377625 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
TBC1D4-201ENST00000377625 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.94□□□□□ -1.62
TBC1D4-201ENST00000377625 LCE1CQ5T751 118 aa4.93□□□□□ -1.62
TBC1D4-201ENST00000377625 LCE1EQ5T753 118 aa4.93□□□□□ -1.62
TBC1D4-201ENST00000377625 LCE1FQ5T754 118 aa4.93□□□□□ -1.62
TBC1D4-201ENST00000377625 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
TBC1D4-201ENST00000377625 USH2AO75445 5202 aa4.6□□□□□ -1.67
TBC1D4-201ENST00000377625 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
TBC1D4-201ENST00000377625 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
TBC1D4-201ENST00000377625 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
TBC1D4-201ENST00000377625 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
TBC1D4-201ENST00000377625 NEBP20929 6669 aa4.3□□□□□ -1.72
TBC1D4-201ENST00000377625 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
TBC1D4-201ENST00000377625 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
TBC1D4-201ENST00000377625 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
TBC1D4-201ENST00000377625 KMT2DO14686 5537 aa4.2□□□□□ -1.74
TBC1D4-201ENST00000377625 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
TBC1D4-201ENST00000377625 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
TBC1D4-201ENST00000377625 MUC19Q7Z5P9 8384 aa4.11□□□□□ -1.75
TBC1D4-201ENST00000377625 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
TBC1D4-201ENST00000377625 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
TBC1D4-201ENST00000377625 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
TBC1D4-201ENST00000377625 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
TBC1D4-201ENST00000377625 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
TBC1D4-201ENST00000377625 GPR98Q8WXG9 6306 aa3.88□□□□□ -1.79
TBC1D4-201ENST00000377625 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
TBC1D4-201ENST00000377625 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
TBC1D4-201ENST00000377625 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
TBC1D4-201ENST00000377625 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
TBC1D4-201ENST00000377625 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
TBC1D4-201ENST00000377625 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
TBC1D4-201ENST00000377625 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
TBC1D4-201ENST00000377625 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
TBC1D4-201ENST00000377625 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
TBC1D4-201ENST00000377625 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
TBC1D4-201ENST00000377625 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
TBC1D4-201ENST00000377625 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
TBC1D4-201ENST00000377625 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
TBC1D4-201ENST00000377625 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
TBC1D4-201ENST00000377625 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
TBC1D4-201ENST00000377625 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
TBC1D4-201ENST00000377625 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
TBC1D4-201ENST00000377625 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
TBC1D4-201ENST00000377625 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 75.9 ms