RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 FAT3Q8TDW7 4589 aa1.52□□□□□ -2.17
SCN2A-202ENST00000375427 BIRC6Q9NR09 4857 aa1.52□□□□□ -2.17
SCN2A-202ENST00000375427 FAT4Q6V0I7 4981 aa1.52□□□□□ -2.17
SCN2A-202ENST00000375427 LCE2AQ5TA79 106 aaPredicted RBP1.52□□□□□ -2.17
SCN2A-202ENST00000375427 KRTAP9-3Q9BYQ3 159 aa1.52□□□□□ -2.17
SCN2A-202ENST00000375427 DNAH5Q8TE73 4624 aa1.51□□□□□ -2.17
SCN2A-202ENST00000375427 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
SCN2A-202ENST00000375427 DYNC1H1Q14204 4646 aaKnown RBP1.51□□□□□ -2.17
SCN2A-202ENST00000375427 KRTAP4-7Q9BYR0 210 aa1.5□□□□□ -2.17
SCN2A-202ENST00000375427 HERC2O95714 4834 aa1.5□□□□□ -2.17
SCN2A-202ENST00000375427 TNXBP22105 4242 aa1.5□□□□□ -2.17
SCN2A-202ENST00000375427 KRTAP19-6Q3LI70 58 aa1.5□□□□□ -2.17
SCN2A-202ENST00000375427 HMCN2Q8NDA2 5059 aa1.49□□□□□ -2.17
SCN2A-202ENST00000375427 SACSQ9NZJ4 4579 aa1.49□□□□□ -2.17
SCN2A-202ENST00000375427 HERC1Q15751 4861 aa1.49□□□□□ -2.17
SCN2A-202ENST00000375427 FAT1Q14517 4588 aa1.49□□□□□ -2.17
SCN2A-202ENST00000375427 LOC100996750A0A140TA64 210 aa1.49□□□□□ -2.17
SCN2A-202ENST00000375427 PLECQ15149 4684 aaKnown RBP1.49□□□□□ -2.17
SCN2A-202ENST00000375427 DNAH9Q9NYC9 4486 aa1.48□□□□□ -2.17
SCN2A-202ENST00000375427 KRTAP4-9Q9BYQ8 210 aa1.48□□□□□ -2.17
SCN2A-202ENST00000375427 APOBP04114 4563 aaKnown RBP1.47□□□□□ -2.17
SCN2A-202ENST00000375427 KRTAP9-7A8MTY7 169 aa1.44□□□□□ -2.18
SCN2A-202ENST00000375427 SYNE2Q8WXH0 6885 aaKnown RBP1.44□□□□□ -2.18
SCN2A-202ENST00000375427 KRTAP9-2Q9BYQ4 174 aa1.44□□□□□ -2.18
SCN2A-202ENST00000375427 STARD9Q9P2P6 4700 aa1.42□□□□□ -2.18
SCN2A-202ENST00000375427 KRTAP9-6A0A140TA67 174 aa1.41□□□□□ -2.18
SCN2A-202ENST00000375427 KRTAP9-9Q9BYP9 154 aa1.4□□□□□ -2.18
SCN2A-202ENST00000375427 KRTAP9-4Q9BYQ2 154 aa1.4□□□□□ -2.19
SCN2A-202ENST00000375427 KRTAP4-11Q9BYQ6 195 aa1.4□□□□□ -2.19
SCN2A-202ENST00000375427 USH2AO75445 5202 aa1.39□□□□□ -2.19
SCN2A-202ENST00000375427 KRTAP20-2Q3LI61 65 aa1.37□□□□□ -2.19
SCN2A-202ENST00000375427 MUC2Q02817 5179 aa1.36□□□□□ -2.19
SCN2A-202ENST00000375427 FSIP2Q5CZC0 6907 aa1.36□□□□□ -2.19
SCN2A-202ENST00000375427 KRTAP9-6A8MVA2 160 aa1.35□□□□□ -2.19
SCN2A-202ENST00000375427 KRTAP4-3Q9BYR4 195 aa1.35□□□□□ -2.19
SCN2A-202ENST00000375427 LRP2P98164 4655 aa1.33□□□□□ -2.2
SCN2A-202ENST00000375427 KRTAP6-3Q3LI67 103 aa1.33□□□□□ -2.2
SCN2A-202ENST00000375427 KRTAP19-2Q3LHN2 52 aa1.33□□□□□ -2.2
SCN2A-202ENST00000375427 KRTAP20-1Q3LI63 56 aa1.32□□□□□ -2.2
SCN2A-202ENST00000375427 MUC17Q685J3 4493 aa1.31□□□□□ -2.2
SCN2A-202ENST00000375427 SSPOA2VEC9 5147 aa1.3□□□□□ -2.2
SCN2A-202ENST00000375427 KRTAP6-1Q3LI64 71 aa1.3□□□□□ -2.2
SCN2A-202ENST00000375427 LPAP08519 4548 aa1.27□□□□□ -2.21
SCN2A-202ENST00000375427 KMT2DO14686 5537 aa1.25□□□□□ -2.21
SCN2A-202ENST00000375427 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
SCN2A-202ENST00000375427 GPR98Q8WXG9 6306 aa1.18□□□□□ -2.22
SCN2A-202ENST00000375427 MUC5BQ9HC84 5762 aaPredicted RBP1.17□□□□□ -2.22
SCN2A-202ENST00000375427 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
SCN2A-202ENST00000375427 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
SCN2A-202ENST00000375427 MUC19Q7Z5P9 8384 aa1.14□□□□□ -2.23
SCN2A-202ENST00000375427 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
SCN2A-202ENST00000375427 KRTAP5-9P26371 169 aa1.13□□□□□ -2.23
SCN2A-202ENST00000375427 MUC12Q9UKN1 5478 aa1.11□□□□□ -2.23
SCN2A-202ENST00000375427 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.11□□□□□ -2.23
SCN2A-202ENST00000375427 KRTAP5-2Q701N4 177 aa1.09□□□□□ -2.24
SCN2A-202ENST00000375427 MACF1Q9UPN3 7388 aaKnown RBP1.08□□□□□ -2.24
SCN2A-202ENST00000375427 MUC5ACP98088 5654 aa1.07□□□□□ -2.24
SCN2A-202ENST00000375427 KRTAP5-5Q701N2 237 aaPredicted RBP1.07□□□□□ -2.24
SCN2A-202ENST00000375427 HMCN1Q96RW7 5635 aa1.06□□□□□ -2.24
SCN2A-202ENST00000375427 KRTAP4-6Q9BYQ5 205 aa1.06□□□□□ -2.24
SCN2A-202ENST00000375427 KRTAP5-4Q6L8H1 288 aa1.02□□□□□ -2.25
SCN2A-202ENST00000375427 KRTAP4-12Q9BQ66 201 aa1.02□□□□□ -2.25
SCN2A-202ENST00000375427 KRTAP4-2Q9BYR5 136 aa1.02□□□□□ -2.25
SCN2A-202ENST00000375427 NEBP20929 6669 aa1.02□□□□□ -2.25
SCN2A-202ENST00000375427 AHNAKQ09666 5890 aaKnown RBP1□□□□□ -2.25
SCN2A-202ENST00000375427 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
SCN2A-202ENST00000375427 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.95□□□□□ -2.26
SCN2A-202ENST00000375427 KRTAP5-3Q6L8H2 238 aa0.91□□□□□ -2.26
SCN2A-202ENST00000375427 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
SCN2A-202ENST00000375427 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
SCN2A-202ENST00000375427 KRTAP5-8O75690 187 aa0.83□□□□□ -2.28
SCN2A-202ENST00000375427 KRTAP5-11Q6L8G4 156 aa0.8□□□□□ -2.28
SCN2A-202ENST00000375427 KRTAP5-7Q6L8G8 165 aa0.78□□□□□ -2.28
SCN2A-202ENST00000375427 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
SCN2A-202ENST00000375427 KRTAP5-1Q6L8H4 278 aa0.76□□□□□ -2.29
SCN2A-202ENST00000375427 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
SCN2A-202ENST00000375427 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 88.3 ms