RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 MT3P25713 68 aa6.02□□□□□ -1.45
COL15A1-201ENST00000375001 MT1MQ8N339 61 aa6.01□□□□□ -1.45
COL15A1-201ENST00000375001 KRTAP4-3Q9BYR4 195 aa6.01□□□□□ -1.45
COL15A1-201ENST00000375001 UBR4Q5T4S7 5183 aa5.97□□□□□ -1.45
COL15A1-201ENST00000375001 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
COL15A1-201ENST00000375001 LCE1BQ5T7P3 118 aa5.89□□□□□ -1.47
COL15A1-201ENST00000375001 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
COL15A1-201ENST00000375001 FAT4Q6V0I7 4981 aa5.86□□□□□ -1.47
COL15A1-201ENST00000375001 MT4P47944 62 aa5.83□□□□□ -1.48
COL15A1-201ENST00000375001 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
COL15A1-201ENST00000375001 FSIP2Q5CZC0 6907 aa5.81□□□□□ -1.48
COL15A1-201ENST00000375001 KRTAP19-6Q3LI70 58 aa5.79□□□□□ -1.48
COL15A1-201ENST00000375001 RNF213Q63HN8 5207 aa5.79□□□□□ -1.48
COL15A1-201ENST00000375001 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
COL15A1-201ENST00000375001 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
COL15A1-201ENST00000375001 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
COL15A1-201ENST00000375001 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
COL15A1-201ENST00000375001 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
COL15A1-201ENST00000375001 MUC2Q02817 5179 aa5.59□□□□□ -1.51
COL15A1-201ENST00000375001 MT1AP04731 61 aa5.58□□□□□ -1.52
COL15A1-201ENST00000375001 LCE2AQ5TA79 106 aaPredicted RBP5.57□□□□□ -1.52
COL15A1-201ENST00000375001 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
COL15A1-201ENST00000375001 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
COL15A1-201ENST00000375001 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
COL15A1-201ENST00000375001 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
COL15A1-201ENST00000375001 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
COL15A1-201ENST00000375001 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
COL15A1-201ENST00000375001 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
COL15A1-201ENST00000375001 FCGBPQ9Y6R7 5405 aaPredicted RBP5.25□□□□□ -1.57
COL15A1-201ENST00000375001 LCE1CQ5T751 118 aa5.18□□□□□ -1.58
COL15A1-201ENST00000375001 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
COL15A1-201ENST00000375001 LCE1FQ5T754 118 aa5.18□□□□□ -1.58
COL15A1-201ENST00000375001 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
COL15A1-201ENST00000375001 KRTAP20-1Q3LI63 56 aa5.13□□□□□ -1.59
COL15A1-201ENST00000375001 USH2AO75445 5202 aa5.13□□□□□ -1.59
COL15A1-201ENST00000375001 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
COL15A1-201ENST00000375001 KMT2DO14686 5537 aa5.06□□□□□ -1.6
COL15A1-201ENST00000375001 DSTQ03001 7570 aaKnown RBP5.04□□□□□ -1.6
COL15A1-201ENST00000375001 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
COL15A1-201ENST00000375001 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
COL15A1-201ENST00000375001 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
COL15A1-201ENST00000375001 KRTAP6-3Q3LI67 103 aa4.82□□□□□ -1.64
COL15A1-201ENST00000375001 MUC19Q7Z5P9 8384 aa4.75□□□□□ -1.65
COL15A1-201ENST00000375001 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
COL15A1-201ENST00000375001 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
COL15A1-201ENST00000375001 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
COL15A1-201ENST00000375001 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
COL15A1-201ENST00000375001 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
COL15A1-201ENST00000375001 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
COL15A1-201ENST00000375001 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
COL15A1-201ENST00000375001 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
COL15A1-201ENST00000375001 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
COL15A1-201ENST00000375001 MDN1Q9NU22 5596 aa4.19□□□□□ -1.74
COL15A1-201ENST00000375001 NEBP20929 6669 aa4.16□□□□□ -1.74
COL15A1-201ENST00000375001 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.75
COL15A1-201ENST00000375001 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.75
COL15A1-201ENST00000375001 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
COL15A1-201ENST00000375001 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
COL15A1-201ENST00000375001 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
COL15A1-201ENST00000375001 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
COL15A1-201ENST00000375001 MUC5ACP98088 5654 aa3.65□□□□□ -1.83
COL15A1-201ENST00000375001 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
COL15A1-201ENST00000375001 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
COL15A1-201ENST00000375001 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
COL15A1-201ENST00000375001 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
COL15A1-201ENST00000375001 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
COL15A1-201ENST00000375001 KRTAP5-8O75690 187 aa3.03□□□□□ -1.93
COL15A1-201ENST00000375001 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
COL15A1-201ENST00000375001 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
COL15A1-201ENST00000375001 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
COL15A1-201ENST00000375001 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
COL15A1-201ENST00000375001 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
COL15A1-201ENST00000375001 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
COL15A1-201ENST00000375001 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
COL15A1-201ENST00000375001 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
COL15A1-201ENST00000375001 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
COL15A1-201ENST00000375001 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 110.8 ms