RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 HMCN2Q8NDA2 5059 aa6.27□□□□□ -1.41
TGFBR1-201ENST00000374990 LCE3EQ5T5B0 92 aa6.24□□□□□ -1.41
TGFBR1-201ENST00000374990 LCE2AQ5TA79 106 aaPredicted RBP6.23□□□□□ -1.41
TGFBR1-201ENST00000374990 MT1MQ8N339 61 aa6.2□□□□□ -1.42
TGFBR1-201ENST00000374990 KRTAP19-7Q3SYF9 63 aa6.16□□□□□ -1.42
TGFBR1-201ENST00000374990 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
TGFBR1-201ENST00000374990 LCE2DQ5TA82 110 aaPredicted RBP5.93□□□□□ -1.46
TGFBR1-201ENST00000374990 MUC2Q02817 5179 aa5.93□□□□□ -1.46
TGFBR1-201ENST00000374990 KRTAP4-3Q9BYR4 195 aa5.92□□□□□ -1.46
TGFBR1-201ENST00000374990 LOC100996750A0A140TA64 210 aa5.91□□□□□ -1.46
TGFBR1-201ENST00000374990 MT3P25713 68 aa5.91□□□□□ -1.46
TGFBR1-201ENST00000374990 KRTAP2-3P0C7H8 128 aa5.9□□□□□ -1.47
TGFBR1-201ENST00000374990 KRTAP2-4Q9BYR9 128 aa5.9□□□□□ -1.47
TGFBR1-201ENST00000374990 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.47
TGFBR1-201ENST00000374990 KRTAP9-2Q9BYQ4 174 aa5.79□□□□□ -1.48
TGFBR1-201ENST00000374990 MT1AP04731 61 aa5.79□□□□□ -1.48
TGFBR1-201ENST00000374990 OBSCNQ5VST9 7968 aa5.73□□□□□ -1.49
TGFBR1-201ENST00000374990 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
TGFBR1-201ENST00000374990 PRM1P04553 51 aa5.64□□□□□ -1.51
TGFBR1-201ENST00000374990 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
TGFBR1-201ENST00000374990 LCE5AQ5TCM9 118 aa5.55□□□□□ -1.52
TGFBR1-201ENST00000374990 MT4P47944 62 aa5.52□□□□□ -1.53
TGFBR1-201ENST00000374990 FCGBPQ9Y6R7 5405 aaPredicted RBP5.48□□□□□ -1.53
TGFBR1-201ENST00000374990 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.53
TGFBR1-201ENST00000374990 USH2AO75445 5202 aa5.44□□□□□ -1.54
TGFBR1-201ENST00000374990 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
TGFBR1-201ENST00000374990 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
TGFBR1-201ENST00000374990 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.55
TGFBR1-201ENST00000374990 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
TGFBR1-201ENST00000374990 DSTQ03001 7570 aaKnown RBP5.33□□□□□ -1.56
TGFBR1-201ENST00000374990 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
TGFBR1-201ENST00000374990 LCE1BQ5T7P3 118 aa5.3□□□□□ -1.56
TGFBR1-201ENST00000374990 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
TGFBR1-201ENST00000374990 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.57
TGFBR1-201ENST00000374990 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
TGFBR1-201ENST00000374990 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.1□□□□□ -1.59
TGFBR1-201ENST00000374990 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
TGFBR1-201ENST00000374990 KMT2DO14686 5537 aa5.08□□□□□ -1.6
TGFBR1-201ENST00000374990 KRTAP20-1Q3LI63 56 aa5□□□□□ -1.61
TGFBR1-201ENST00000374990 MUC12Q9UKN1 5478 aa4.93□□□□□ -1.62
TGFBR1-201ENST00000374990 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
TGFBR1-201ENST00000374990 SSPOA2VEC9 5147 aa4.92□□□□□ -1.62
TGFBR1-201ENST00000374990 KRTAP5-9P26371 169 aa4.88□□□□□ -1.63
TGFBR1-201ENST00000374990 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
TGFBR1-201ENST00000374990 MDN1Q9NU22 5596 aa4.71□□□□□ -1.66
TGFBR1-201ENST00000374990 MUC19Q7Z5P9 8384 aa4.62□□□□□ -1.67
TGFBR1-201ENST00000374990 NEBP20929 6669 aa4.52□□□□□ -1.69
TGFBR1-201ENST00000374990 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
TGFBR1-201ENST00000374990 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
TGFBR1-201ENST00000374990 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
TGFBR1-201ENST00000374990 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
TGFBR1-201ENST00000374990 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
TGFBR1-201ENST00000374990 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
TGFBR1-201ENST00000374990 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
TGFBR1-201ENST00000374990 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
TGFBR1-201ENST00000374990 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
TGFBR1-201ENST00000374990 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
TGFBR1-201ENST00000374990 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
TGFBR1-201ENST00000374990 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
TGFBR1-201ENST00000374990 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
TGFBR1-201ENST00000374990 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
TGFBR1-201ENST00000374990 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
TGFBR1-201ENST00000374990 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
TGFBR1-201ENST00000374990 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
TGFBR1-201ENST00000374990 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
TGFBR1-201ENST00000374990 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
TGFBR1-201ENST00000374990 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
TGFBR1-201ENST00000374990 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
TGFBR1-201ENST00000374990 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
TGFBR1-201ENST00000374990 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
TGFBR1-201ENST00000374990 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
TGFBR1-201ENST00000374990 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
TGFBR1-201ENST00000374990 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
TGFBR1-201ENST00000374990 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
TGFBR1-201ENST00000374990 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
TGFBR1-201ENST00000374990 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
TGFBR1-201ENST00000374990 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 17.1 ms