RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 KRTAP4-8Q9BYQ9 185 aa2.22□□□□□ -2.05
ABCA1-202ENST00000374736 KRTAP9-6A8MVA2 160 aa2.22□□□□□ -2.05
ABCA1-202ENST00000374736 RYR2Q92736 4967 aa2.21□□□□□ -2.06
ABCA1-202ENST00000374736 HERC1Q15751 4861 aa2.21□□□□□ -2.06
ABCA1-202ENST00000374736 DNHD1Q96M86 4753 aa2.19□□□□□ -2.06
ABCA1-202ENST00000374736 KRTAP9-4Q9BYQ2 154 aa2.17□□□□□ -2.06
ABCA1-202ENST00000374736 KRTAP19-2Q3LHN2 52 aa2.16□□□□□ -2.06
ABCA1-202ENST00000374736 KRTAP4-7Q9BYR0 210 aa2.16□□□□□ -2.06
ABCA1-202ENST00000374736 SYNE1Q8NF91 8797 aaKnown RBP2.15□□□□□ -2.07
ABCA1-202ENST00000374736 MUC17Q685J3 4493 aa2.15□□□□□ -2.07
ABCA1-202ENST00000374736 KRTAP17-1Q9BYP8 105 aa2.13□□□□□ -2.07
ABCA1-202ENST00000374736 KRTAP19-7Q3SYF9 63 aa2.11□□□□□ -2.07
ABCA1-202ENST00000374736 HERC2O95714 4834 aa2.11□□□□□ -2.07
ABCA1-202ENST00000374736 HYDINQ4G0P3 5121 aa2.11□□□□□ -2.07
ABCA1-202ENST00000374736 LOC100996750A0A140TA64 210 aa2.05□□□□□ -2.08
ABCA1-202ENST00000374736 BIRC6Q9NR09 4857 aa2.04□□□□□ -2.08
ABCA1-202ENST00000374736 KMT2CQ8NEZ4 4911 aaKnown RBP2.04□□□□□ -2.08
ABCA1-202ENST00000374736 LCE4AQ5TA78 99 aa2.03□□□□□ -2.08
ABCA1-202ENST00000374736 KIAA1109Q2LD37 5005 aa2.03□□□□□ -2.08
ABCA1-202ENST00000374736 KRTAP4-9Q9BYQ8 210 aa2□□□□□ -2.09
ABCA1-202ENST00000374736 LRP2P98164 4655 aa1.99□□□□□ -2.09
ABCA1-202ENST00000374736 KRTAP4-3Q9BYR4 195 aa1.98□□□□□ -2.09
ABCA1-202ENST00000374736 EPPK1P58107 5090 aaKnown RBP1.96□□□□□ -2.1
ABCA1-202ENST00000374736 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
ABCA1-202ENST00000374736 MT4P47944 62 aa1.94□□□□□ -2.1
ABCA1-202ENST00000374736 KRTAP20-1Q3LI63 56 aa1.94□□□□□ -2.1
ABCA1-202ENST00000374736 RNF213Q63HN8 5207 aa1.93□□□□□ -2.1
ABCA1-202ENST00000374736 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
ABCA1-202ENST00000374736 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
ABCA1-202ENST00000374736 HMCN2Q8NDA2 5059 aa1.87□□□□□ -2.11
ABCA1-202ENST00000374736 UBR4Q5T4S7 5183 aa1.86□□□□□ -2.11
ABCA1-202ENST00000374736 ABCA13Q86UQ4 5058 aa1.85□□□□□ -2.11
ABCA1-202ENST00000374736 KRTAP9-9Q9BYP9 154 aa1.84□□□□□ -2.11
ABCA1-202ENST00000374736 KRTAP4-11Q9BYQ6 195 aa1.84□□□□□ -2.12
ABCA1-202ENST00000374736 LPAP08519 4548 aa1.76□□□□□ -2.13
ABCA1-202ENST00000374736 KRTAP5-9P26371 169 aa1.74□□□□□ -2.13
ABCA1-202ENST00000374736 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.74□□□□□ -2.13
ABCA1-202ENST00000374736 FAT4Q6V0I7 4981 aa1.71□□□□□ -2.14
ABCA1-202ENST00000374736 MUC12Q9UKN1 5478 aa1.7□□□□□ -2.14
ABCA1-202ENST00000374736 LCE1CQ5T751 118 aa1.65□□□□□ -2.14
ABCA1-202ENST00000374736 MUC2Q02817 5179 aa1.61□□□□□ -2.15
ABCA1-202ENST00000374736 SYNE2Q8WXH0 6885 aaKnown RBP1.6□□□□□ -2.15
ABCA1-202ENST00000374736 KMT2DO14686 5537 aa1.59□□□□□ -2.15
ABCA1-202ENST00000374736 USH2AO75445 5202 aa1.57□□□□□ -2.16
ABCA1-202ENST00000374736 MDN1Q9NU22 5596 aa1.56□□□□□ -2.16
ABCA1-202ENST00000374736 KRTAP5-4Q6L8H1 288 aa1.56□□□□□ -2.16
ABCA1-202ENST00000374736 NEBP20929 6669 aa1.55□□□□□ -2.16
ABCA1-202ENST00000374736 FCGBPQ9Y6R7 5405 aaPredicted RBP1.52□□□□□ -2.17
ABCA1-202ENST00000374736 KRTAP20-2Q3LI61 65 aa1.51□□□□□ -2.17
ABCA1-202ENST00000374736 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
ABCA1-202ENST00000374736 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
ABCA1-202ENST00000374736 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
ABCA1-202ENST00000374736 FSIP2Q5CZC0 6907 aa1.44□□□□□ -2.18
ABCA1-202ENST00000374736 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
ABCA1-202ENST00000374736 OBSCNQ5VST9 7968 aa1.43□□□□□ -2.18
ABCA1-202ENST00000374736 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
ABCA1-202ENST00000374736 AHNAK2Q8IVF2 5795 aa1.39□□□□□ -2.19
ABCA1-202ENST00000374736 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
ABCA1-202ENST00000374736 KRTAP5-3Q6L8H2 238 aa1.37□□□□□ -2.19
ABCA1-202ENST00000374736 KRTAP4-6Q9BYQ5 205 aa1.37□□□□□ -2.19
ABCA1-202ENST00000374736 KRTAP4-4Q9BYR3 166 aa1.36□□□□□ -2.19
ABCA1-202ENST00000374736 GPR98Q8WXG9 6306 aa1.35□□□□□ -2.19
ABCA1-202ENST00000374736 KRTAP5-2Q701N4 177 aa1.35□□□□□ -2.19
ABCA1-202ENST00000374736 KRTAP4-12Q9BQ66 201 aa1.29□□□□□ -2.2
ABCA1-202ENST00000374736 KRTAP4-2Q9BYR5 136 aa1.29□□□□□ -2.2
ABCA1-202ENST00000374736 MUC5BQ9HC84 5762 aaPredicted RBP1.28□□□□□ -2.21
ABCA1-202ENST00000374736 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
ABCA1-202ENST00000374736 DSTQ03001 7570 aaKnown RBP1.21□□□□□ -2.22
ABCA1-202ENST00000374736 KRTAP5-8O75690 187 aa1.21□□□□□ -2.22
ABCA1-202ENST00000374736 KRTAP5-11Q6L8G4 156 aa1.16□□□□□ -2.22
ABCA1-202ENST00000374736 KRTAP5-1Q6L8H4 278 aa1.14□□□□□ -2.23
ABCA1-202ENST00000374736 MACF1Q9UPN3 7388 aaKnown RBP1.11□□□□□ -2.23
ABCA1-202ENST00000374736 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.11□□□□□ -2.23
ABCA1-202ENST00000374736 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
ABCA1-202ENST00000374736 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
ABCA1-202ENST00000374736 KRTAP5-7Q6L8G8 165 aa0.97□□□□□ -2.25
ABCA1-202ENST00000374736 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 8.3 ms