RNA–Protein interactions for RNA: ENST00000374012.7

PHF20-203, Transcript of PHD finger protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF20, Length 5,922 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-203ENST00000374012 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
PHF20-203ENST00000374012 LRP2P98164 4655 aa3.8□□□□□ -1.8
PHF20-203ENST00000374012 EPPK1P58107 5090 aaKnown RBP3.77□□□□□ -1.81
PHF20-203ENST00000374012 LCE2AQ5TA79 106 aaPredicted RBP3.77□□□□□ -1.81
PHF20-203ENST00000374012 PRM1P04553 51 aa3.77□□□□□ -1.81
PHF20-203ENST00000374012 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
PHF20-203ENST00000374012 MT1AP04731 61 aa3.75□□□□□ -1.81
PHF20-203ENST00000374012 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
PHF20-203ENST00000374012 LCE1DQ5T752 114 aa3.75□□□□□ -1.81
PHF20-203ENST00000374012 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
PHF20-203ENST00000374012 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
PHF20-203ENST00000374012 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
PHF20-203ENST00000374012 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
PHF20-203ENST00000374012 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
PHF20-203ENST00000374012 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
PHF20-203ENST00000374012 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
PHF20-203ENST00000374012 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
PHF20-203ENST00000374012 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.84
PHF20-203ENST00000374012 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
PHF20-203ENST00000374012 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
PHF20-203ENST00000374012 HMCN2Q8NDA2 5059 aa3.5□□□□□ -1.85
PHF20-203ENST00000374012 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
PHF20-203ENST00000374012 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.85
PHF20-203ENST00000374012 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.45□□□□□ -1.86
PHF20-203ENST00000374012 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
PHF20-203ENST00000374012 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
PHF20-203ENST00000374012 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
PHF20-203ENST00000374012 RNF213Q63HN8 5207 aa3.41□□□□□ -1.86
PHF20-203ENST00000374012 FAT4Q6V0I7 4981 aa3.4□□□□□ -1.86
PHF20-203ENST00000374012 MUC2Q02817 5179 aa3.38□□□□□ -1.87
PHF20-203ENST00000374012 UBR4Q5T4S7 5183 aa3.33□□□□□ -1.88
PHF20-203ENST00000374012 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
PHF20-203ENST00000374012 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
PHF20-203ENST00000374012 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
PHF20-203ENST00000374012 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
PHF20-203ENST00000374012 SYNE2Q8WXH0 6885 aaKnown RBP3.19□□□□□ -1.9
PHF20-203ENST00000374012 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
PHF20-203ENST00000374012 FSIP2Q5CZC0 6907 aa3.09□□□□□ -1.91
PHF20-203ENST00000374012 KRTAP5-9P26371 169 aa3□□□□□ -1.93
PHF20-203ENST00000374012 USH2AO75445 5202 aa2.92□□□□□ -1.94
PHF20-203ENST00000374012 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
PHF20-203ENST00000374012 NEBP20929 6669 aa2.83□□□□□ -1.96
PHF20-203ENST00000374012 KRTAP4-6Q9BYQ5 205 aa2.82□□□□□ -1.96
PHF20-203ENST00000374012 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
PHF20-203ENST00000374012 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
PHF20-203ENST00000374012 SSPOA2VEC9 5147 aa2.75□□□□□ -1.97
PHF20-203ENST00000374012 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
PHF20-203ENST00000374012 SYNE1Q8NF91 8797 aaKnown RBP2.7□□□□□ -1.98
PHF20-203ENST00000374012 KMT2DO14686 5537 aa2.69□□□□□ -1.98
PHF20-203ENST00000374012 FCGBPQ9Y6R7 5405 aaPredicted RBP2.59□□□□□ -1.99
PHF20-203ENST00000374012 MACF1Q9UPN3 7388 aaKnown RBP2.57□□□□□ -2
PHF20-203ENST00000374012 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2
PHF20-203ENST00000374012 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
PHF20-203ENST00000374012 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
PHF20-203ENST00000374012 MUC12Q9UKN1 5478 aa2.51□□□□□ -2.01
PHF20-203ENST00000374012 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
PHF20-203ENST00000374012 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
PHF20-203ENST00000374012 KRTAP5-3Q6L8H2 238 aa2.37□□□□□ -2.03
PHF20-203ENST00000374012 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
PHF20-203ENST00000374012 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
PHF20-203ENST00000374012 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
PHF20-203ENST00000374012 MUC5ACP98088 5654 aa2.09□□□□□ -2.08
PHF20-203ENST00000374012 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
PHF20-203ENST00000374012 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
PHF20-203ENST00000374012 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
PHF20-203ENST00000374012 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
PHF20-203ENST00000374012 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
PHF20-203ENST00000374012 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
PHF20-203ENST00000374012 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
PHF20-203ENST00000374012 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
PHF20-203ENST00000374012 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
PHF20-203ENST00000374012 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
PHF20-203ENST00000374012 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
PHF20-203ENST00000374012 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
PHF20-203ENST00000374012 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
PHF20-203ENST00000374012 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
PHF20-203ENST00000374012 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 204 ms