RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 KRTAP19-2Q3LHN2 52 aa3.03□□□□□ -1.92
TRERF1-204ENST00000372922 PKHD1P08F94 4074 aa3.02□□□□□ -1.93
TRERF1-204ENST00000372922 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
TRERF1-204ENST00000372922 FLGP20930 4061 aaPredicted RBP3□□□□□ -1.93
TRERF1-204ENST00000372922 EPPK1P58107 5090 aaKnown RBP2.99□□□□□ -1.93
TRERF1-204ENST00000372922 LPAP08519 4548 aa2.99□□□□□ -1.93
TRERF1-204ENST00000372922 KRTAP4-9Q9BYQ8 210 aa2.97□□□□□ -1.93
TRERF1-204ENST00000372922 TNXBP22105 4242 aa2.96□□□□□ -1.94
TRERF1-204ENST00000372922 LOC100996750A0A140TA64 210 aa2.95□□□□□ -1.94
TRERF1-204ENST00000372922 HERC2O95714 4834 aa2.94□□□□□ -1.94
TRERF1-204ENST00000372922 BIRC6Q9NR09 4857 aa2.93□□□□□ -1.94
TRERF1-204ENST00000372922 ABCA13Q86UQ4 5058 aa2.93□□□□□ -1.94
TRERF1-204ENST00000372922 LRP2P98164 4655 aa2.92□□□□□ -1.94
TRERF1-204ENST00000372922 MUC17Q685J3 4493 aa2.92□□□□□ -1.94
TRERF1-204ENST00000372922 KRTAP4-3Q9BYR4 195 aa2.92□□□□□ -1.94
TRERF1-204ENST00000372922 PCLOQ9Y6V0 5065 aa2.9□□□□□ -1.95
TRERF1-204ENST00000372922 MT1AP04731 61 aa2.88□□□□□ -1.95
TRERF1-204ENST00000372922 LCE4AQ5TA78 99 aa2.84□□□□□ -1.95
TRERF1-204ENST00000372922 LCE2AQ5TA79 106 aaPredicted RBP2.84□□□□□ -1.96
TRERF1-204ENST00000372922 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
TRERF1-204ENST00000372922 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
TRERF1-204ENST00000372922 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
TRERF1-204ENST00000372922 KRTAP2-1Q9BYU5 128 aa2.8□□□□□ -1.96
TRERF1-204ENST00000372922 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
TRERF1-204ENST00000372922 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
TRERF1-204ENST00000372922 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
TRERF1-204ENST00000372922 UBR4Q5T4S7 5183 aa2.68□□□□□ -1.98
TRERF1-204ENST00000372922 HMCN2Q8NDA2 5059 aa2.68□□□□□ -1.98
TRERF1-204ENST00000372922 KRTAP9-4Q9BYQ2 154 aa2.67□□□□□ -1.98
TRERF1-204ENST00000372922 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.67□□□□□ -1.98
TRERF1-204ENST00000372922 RNF213Q63HN8 5207 aa2.66□□□□□ -1.98
TRERF1-204ENST00000372922 KRTAP2-2Q9BYT5 123 aa2.66□□□□□ -1.98
TRERF1-204ENST00000372922 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
TRERF1-204ENST00000372922 MUC2Q02817 5179 aa2.63□□□□□ -1.99
TRERF1-204ENST00000372922 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
TRERF1-204ENST00000372922 FAT4Q6V0I7 4981 aa2.58□□□□□ -2
TRERF1-204ENST00000372922 FSIP2Q5CZC0 6907 aa2.57□□□□□ -2
TRERF1-204ENST00000372922 SYNE1Q8NF91 8797 aaKnown RBP2.51□□□□□ -2.01
TRERF1-204ENST00000372922 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
TRERF1-204ENST00000372922 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
TRERF1-204ENST00000372922 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
TRERF1-204ENST00000372922 KRTAP4-6Q9BYQ5 205 aa2.37□□□□□ -2.03
TRERF1-204ENST00000372922 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
TRERF1-204ENST00000372922 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
TRERF1-204ENST00000372922 KRTAP4-2Q9BYR5 136 aa2.33□□□□□ -2.04
TRERF1-204ENST00000372922 USH2AO75445 5202 aa2.29□□□□□ -2.04
TRERF1-204ENST00000372922 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
TRERF1-204ENST00000372922 KRTAP5-9P26371 169 aa2.24□□□□□ -2.05
TRERF1-204ENST00000372922 SSPOA2VEC9 5147 aa2.17□□□□□ -2.06
TRERF1-204ENST00000372922 KMT2DO14686 5537 aa2.12□□□□□ -2.07
TRERF1-204ENST00000372922 NEBP20929 6669 aa2.11□□□□□ -2.07
TRERF1-204ENST00000372922 DSTQ03001 7570 aaKnown RBP2.09□□□□□ -2.08
TRERF1-204ENST00000372922 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
TRERF1-204ENST00000372922 MACF1Q9UPN3 7388 aaKnown RBP2.06□□□□□ -2.08
TRERF1-204ENST00000372922 FCGBPQ9Y6R7 5405 aaPredicted RBP2.04□□□□□ -2.08
TRERF1-204ENST00000372922 MUC12Q9UKN1 5478 aa1.98□□□□□ -2.09
TRERF1-204ENST00000372922 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
TRERF1-204ENST00000372922 KRTAP5-5Q701N2 237 aaPredicted RBP1.86□□□□□ -2.11
TRERF1-204ENST00000372922 MDN1Q9NU22 5596 aa1.84□□□□□ -2.11
TRERF1-204ENST00000372922 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
TRERF1-204ENST00000372922 KRTAP5-3Q6L8H2 238 aa1.78□□□□□ -2.12
TRERF1-204ENST00000372922 GPR98Q8WXG9 6306 aa1.78□□□□□ -2.13
TRERF1-204ENST00000372922 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
TRERF1-204ENST00000372922 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
TRERF1-204ENST00000372922 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
TRERF1-204ENST00000372922 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.17
TRERF1-204ENST00000372922 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
TRERF1-204ENST00000372922 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
TRERF1-204ENST00000372922 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
TRERF1-204ENST00000372922 KRTAP5-11Q6L8G4 156 aa1.41□□□□□ -2.18
TRERF1-204ENST00000372922 KRTAP5-1Q6L8H4 278 aa1.36□□□□□ -2.19
TRERF1-204ENST00000372922 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
TRERF1-204ENST00000372922 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
TRERF1-204ENST00000372922 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.21
TRERF1-204ENST00000372922 KRTAP5-7Q6L8G8 165 aa1.24□□□□□ -2.21
TRERF1-204ENST00000372922 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.19□□□□□ -2.22
TRERF1-204ENST00000372922 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 39.3 ms