RNA–Protein interactions for RNA: ENST00000372443.6

KCNMA1-209, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-209ENST00000372443 LCE3DQ9BYE3 92 aa6.76□□□□□ -1.33
KCNMA1-209ENST00000372443 KRTAP19-3Q7Z4W3 81 aa6.75□□□□□ -1.33
KCNMA1-209ENST00000372443 FAT4Q6V0I7 4981 aa6.68□□□□□ -1.34
KCNMA1-209ENST00000372443 HMCN2Q8NDA2 5059 aa6.66□□□□□ -1.34
KCNMA1-209ENST00000372443 LCE3EQ5T5B0 92 aa6.65□□□□□ -1.34
KCNMA1-209ENST00000372443 RNF213Q63HN8 5207 aa6.64□□□□□ -1.35
KCNMA1-209ENST00000372443 MT3P25713 68 aa6.61□□□□□ -1.35
KCNMA1-209ENST00000372443 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
KCNMA1-209ENST00000372443 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
KCNMA1-209ENST00000372443 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
KCNMA1-209ENST00000372443 MT1MQ8N339 61 aa6.51□□□□□ -1.37
KCNMA1-209ENST00000372443 MUC2Q02817 5179 aa6.5□□□□□ -1.37
KCNMA1-209ENST00000372443 KRTAP19-7Q3SYF9 63 aa6.44□□□□□ -1.38
KCNMA1-209ENST00000372443 OBSCNQ5VST9 7968 aa6.32□□□□□ -1.4
KCNMA1-209ENST00000372443 KRTAP6-3Q3LI67 103 aa6.24□□□□□ -1.41
KCNMA1-209ENST00000372443 PRM1P04553 51 aa6.24□□□□□ -1.41
KCNMA1-209ENST00000372443 LCE1AQ5T7P2 110 aa6.23□□□□□ -1.41
KCNMA1-209ENST00000372443 KRTAP2-3P0C7H8 128 aa6.19□□□□□ -1.42
KCNMA1-209ENST00000372443 KRTAP2-4Q9BYR9 128 aa6.19□□□□□ -1.42
KCNMA1-209ENST00000372443 KRTAP2-1Q9BYU5 128 aa6.19□□□□□ -1.42
KCNMA1-209ENST00000372443 KRTAP9-6A8MVA2 160 aa6.15□□□□□ -1.43
KCNMA1-209ENST00000372443 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
KCNMA1-209ENST00000372443 MT4P47944 62 aa6.13□□□□□ -1.43
KCNMA1-209ENST00000372443 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
KCNMA1-209ENST00000372443 FCGBPQ9Y6R7 5405 aaPredicted RBP6.09□□□□□ -1.44
KCNMA1-209ENST00000372443 SYNE2Q8WXH0 6885 aaKnown RBP6.06□□□□□ -1.44
KCNMA1-209ENST00000372443 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
KCNMA1-209ENST00000372443 MT1AP04731 61 aa6□□□□□ -1.45
KCNMA1-209ENST00000372443 KRTAP20-1Q3LI63 56 aa5.96□□□□□ -1.46
KCNMA1-209ENST00000372443 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
KCNMA1-209ENST00000372443 LCE1BQ5T7P3 118 aa5.91□□□□□ -1.46
KCNMA1-209ENST00000372443 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
KCNMA1-209ENST00000372443 USH2AO75445 5202 aa5.88□□□□□ -1.47
KCNMA1-209ENST00000372443 LCE5AQ5TCM9 118 aa5.85□□□□□ -1.47
KCNMA1-209ENST00000372443 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
KCNMA1-209ENST00000372443 KMT2DO14686 5537 aa5.77□□□□□ -1.49
KCNMA1-209ENST00000372443 LCE4AQ5TA78 99 aa5.76□□□□□ -1.49
KCNMA1-209ENST00000372443 KRTAP2-2Q9BYT5 123 aa5.72□□□□□ -1.49
KCNMA1-209ENST00000372443 KRTAP6-2Q3LI66 62 aa5.6□□□□□ -1.51
KCNMA1-209ENST00000372443 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
KCNMA1-209ENST00000372443 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
KCNMA1-209ENST00000372443 MUC12Q9UKN1 5478 aa5.39□□□□□ -1.55
KCNMA1-209ENST00000372443 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
KCNMA1-209ENST00000372443 SSPOA2VEC9 5147 aa5.3□□□□□ -1.56
KCNMA1-209ENST00000372443 MUC19Q7Z5P9 8384 aa5.08□□□□□ -1.6
KCNMA1-209ENST00000372443 NEBP20929 6669 aa5.05□□□□□ -1.6
KCNMA1-209ENST00000372443 LCE1CQ5T751 118 aa5.01□□□□□ -1.61
KCNMA1-209ENST00000372443 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
KCNMA1-209ENST00000372443 LCE1FQ5T754 118 aa5.01□□□□□ -1.61
KCNMA1-209ENST00000372443 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
KCNMA1-209ENST00000372443 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
KCNMA1-209ENST00000372443 KRTAP20-2Q3LI61 65 aa4.81□□□□□ -1.64
KCNMA1-209ENST00000372443 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
KCNMA1-209ENST00000372443 KRTAP9-9Q9BYP9 154 aa4.7□□□□□ -1.66
KCNMA1-209ENST00000372443 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
KCNMA1-209ENST00000372443 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
KCNMA1-209ENST00000372443 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
KCNMA1-209ENST00000372443 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
KCNMA1-209ENST00000372443 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
KCNMA1-209ENST00000372443 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
KCNMA1-209ENST00000372443 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
KCNMA1-209ENST00000372443 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
KCNMA1-209ENST00000372443 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
KCNMA1-209ENST00000372443 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
KCNMA1-209ENST00000372443 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
KCNMA1-209ENST00000372443 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
KCNMA1-209ENST00000372443 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
KCNMA1-209ENST00000372443 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
KCNMA1-209ENST00000372443 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
KCNMA1-209ENST00000372443 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
KCNMA1-209ENST00000372443 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
KCNMA1-209ENST00000372443 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
KCNMA1-209ENST00000372443 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
KCNMA1-209ENST00000372443 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
KCNMA1-209ENST00000372443 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
KCNMA1-209ENST00000372443 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
KCNMA1-209ENST00000372443 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms