RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 MT1EP04732 61 aa4.51□□□□□ -1.69
RAPGEF1-202ENST00000372190 MT1LQ93083 61 aa4.5□□□□□ -1.69
RAPGEF1-202ENST00000372190 MT4P47944 62 aa4.47□□□□□ -1.69
RAPGEF1-202ENST00000372190 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
RAPGEF1-202ENST00000372190 MT1MQ8N339 61 aa4.39□□□□□ -1.71
RAPGEF1-202ENST00000372190 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
RAPGEF1-202ENST00000372190 FAT4Q6V0I7 4981 aa4.38□□□□□ -1.71
RAPGEF1-202ENST00000372190 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
RAPGEF1-202ENST00000372190 RNF213Q63HN8 5207 aa4.33□□□□□ -1.72
RAPGEF1-202ENST00000372190 KRTAP6-3Q3LI67 103 aa4.27□□□□□ -1.73
RAPGEF1-202ENST00000372190 UBR4Q5T4S7 5183 aa4.23□□□□□ -1.73
RAPGEF1-202ENST00000372190 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
RAPGEF1-202ENST00000372190 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
RAPGEF1-202ENST00000372190 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
RAPGEF1-202ENST00000372190 HMCN2Q8NDA2 5059 aa4.19□□□□□ -1.74
RAPGEF1-202ENST00000372190 FSIP2Q5CZC0 6907 aa4.17□□□□□ -1.74
RAPGEF1-202ENST00000372190 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
RAPGEF1-202ENST00000372190 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
RAPGEF1-202ENST00000372190 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
RAPGEF1-202ENST00000372190 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
RAPGEF1-202ENST00000372190 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
RAPGEF1-202ENST00000372190 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
RAPGEF1-202ENST00000372190 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
RAPGEF1-202ENST00000372190 MT1AP04731 61 aa4.03□□□□□ -1.76
RAPGEF1-202ENST00000372190 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
RAPGEF1-202ENST00000372190 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
RAPGEF1-202ENST00000372190 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
RAPGEF1-202ENST00000372190 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
RAPGEF1-202ENST00000372190 MUC2Q02817 5179 aa3.94□□□□□ -1.78
RAPGEF1-202ENST00000372190 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
RAPGEF1-202ENST00000372190 KRTAP6-2Q3LI66 62 aa3.85□□□□□ -1.79
RAPGEF1-202ENST00000372190 KRTAP6-1Q3LI64 71 aa3.78□□□□□ -1.8
RAPGEF1-202ENST00000372190 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
RAPGEF1-202ENST00000372190 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
RAPGEF1-202ENST00000372190 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.82
RAPGEF1-202ENST00000372190 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
RAPGEF1-202ENST00000372190 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
RAPGEF1-202ENST00000372190 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
RAPGEF1-202ENST00000372190 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
RAPGEF1-202ENST00000372190 USH2AO75445 5202 aa3.57□□□□□ -1.84
RAPGEF1-202ENST00000372190 NEBP20929 6669 aa3.51□□□□□ -1.85
RAPGEF1-202ENST00000372190 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
RAPGEF1-202ENST00000372190 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
RAPGEF1-202ENST00000372190 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
RAPGEF1-202ENST00000372190 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
RAPGEF1-202ENST00000372190 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
RAPGEF1-202ENST00000372190 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
RAPGEF1-202ENST00000372190 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
RAPGEF1-202ENST00000372190 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
RAPGEF1-202ENST00000372190 KMT2DO14686 5537 aa3.28□□□□□ -1.88
RAPGEF1-202ENST00000372190 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
RAPGEF1-202ENST00000372190 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
RAPGEF1-202ENST00000372190 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
RAPGEF1-202ENST00000372190 MDN1Q9NU22 5596 aa2.96□□□□□ -1.94
RAPGEF1-202ENST00000372190 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.94
RAPGEF1-202ENST00000372190 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.94
RAPGEF1-202ENST00000372190 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
RAPGEF1-202ENST00000372190 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
RAPGEF1-202ENST00000372190 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
RAPGEF1-202ENST00000372190 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
RAPGEF1-202ENST00000372190 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
RAPGEF1-202ENST00000372190 KRTAP5-8O75690 187 aa2.55□□□□□ -2
RAPGEF1-202ENST00000372190 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
RAPGEF1-202ENST00000372190 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
RAPGEF1-202ENST00000372190 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
RAPGEF1-202ENST00000372190 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
RAPGEF1-202ENST00000372190 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
RAPGEF1-202ENST00000372190 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
RAPGEF1-202ENST00000372190 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
RAPGEF1-202ENST00000372190 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
RAPGEF1-202ENST00000372190 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
RAPGEF1-202ENST00000372190 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
RAPGEF1-202ENST00000372190 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
RAPGEF1-202ENST00000372190 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
RAPGEF1-202ENST00000372190 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
RAPGEF1-202ENST00000372190 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
RAPGEF1-202ENST00000372190 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 104.3 ms