RNA–Protein interactions for RNA: ENST00000371608.6

BCAS4-202, Transcript of breast carcinoma amplified sequence 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BCAS4, Length 6,680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-202ENST00000371608 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.75
BCAS4-202ENST00000371608 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.75
BCAS4-202ENST00000371608 ABCA13Q86UQ4 5058 aa4.09□□□□□ -1.76
BCAS4-202ENST00000371608 MT1MQ8N339 61 aa4.09□□□□□ -1.76
BCAS4-202ENST00000371608 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
BCAS4-202ENST00000371608 LCE2AQ5TA79 106 aaPredicted RBP4.08□□□□□ -1.76
BCAS4-202ENST00000371608 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
BCAS4-202ENST00000371608 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
BCAS4-202ENST00000371608 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
BCAS4-202ENST00000371608 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
BCAS4-202ENST00000371608 MT3P25713 68 aa3.99□□□□□ -1.77
BCAS4-202ENST00000371608 FAT4Q6V0I7 4981 aa3.98□□□□□ -1.77
BCAS4-202ENST00000371608 UBR4Q5T4S7 5183 aa3.96□□□□□ -1.77
BCAS4-202ENST00000371608 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
BCAS4-202ENST00000371608 RNF213Q63HN8 5207 aa3.88□□□□□ -1.79
BCAS4-202ENST00000371608 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
BCAS4-202ENST00000371608 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
BCAS4-202ENST00000371608 MUC2Q02817 5179 aa3.85□□□□□ -1.79
BCAS4-202ENST00000371608 HMCN2Q8NDA2 5059 aa3.84□□□□□ -1.8
BCAS4-202ENST00000371608 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
BCAS4-202ENST00000371608 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
BCAS4-202ENST00000371608 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
BCAS4-202ENST00000371608 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
BCAS4-202ENST00000371608 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
BCAS4-202ENST00000371608 PRM1P04553 51 aa3.73□□□□□ -1.81
BCAS4-202ENST00000371608 MT1AP04731 61 aa3.71□□□□□ -1.82
BCAS4-202ENST00000371608 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
BCAS4-202ENST00000371608 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
BCAS4-202ENST00000371608 KRTAP2-1Q9BYU5 128 aa3.68□□□□□ -1.82
BCAS4-202ENST00000371608 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
BCAS4-202ENST00000371608 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
BCAS4-202ENST00000371608 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
BCAS4-202ENST00000371608 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
BCAS4-202ENST00000371608 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
BCAS4-202ENST00000371608 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
BCAS4-202ENST00000371608 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
BCAS4-202ENST00000371608 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
BCAS4-202ENST00000371608 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
BCAS4-202ENST00000371608 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
BCAS4-202ENST00000371608 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
BCAS4-202ENST00000371608 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
BCAS4-202ENST00000371608 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
BCAS4-202ENST00000371608 USH2AO75445 5202 aa3.27□□□□□ -1.89
BCAS4-202ENST00000371608 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
BCAS4-202ENST00000371608 NEBP20929 6669 aa3.23□□□□□ -1.89
BCAS4-202ENST00000371608 KMT2DO14686 5537 aa3.22□□□□□ -1.89
BCAS4-202ENST00000371608 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
BCAS4-202ENST00000371608 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
BCAS4-202ENST00000371608 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
BCAS4-202ENST00000371608 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
BCAS4-202ENST00000371608 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
BCAS4-202ENST00000371608 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
BCAS4-202ENST00000371608 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
BCAS4-202ENST00000371608 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
BCAS4-202ENST00000371608 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
BCAS4-202ENST00000371608 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
BCAS4-202ENST00000371608 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
BCAS4-202ENST00000371608 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
BCAS4-202ENST00000371608 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
BCAS4-202ENST00000371608 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
BCAS4-202ENST00000371608 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
BCAS4-202ENST00000371608 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
BCAS4-202ENST00000371608 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
BCAS4-202ENST00000371608 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
BCAS4-202ENST00000371608 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
BCAS4-202ENST00000371608 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.07
BCAS4-202ENST00000371608 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
BCAS4-202ENST00000371608 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
BCAS4-202ENST00000371608 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
BCAS4-202ENST00000371608 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
BCAS4-202ENST00000371608 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
BCAS4-202ENST00000371608 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
BCAS4-202ENST00000371608 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
BCAS4-202ENST00000371608 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
BCAS4-202ENST00000371608 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
BCAS4-202ENST00000371608 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
BCAS4-202ENST00000371608 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 50.3 ms