RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
TMEM56-201ENST00000370203 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
TMEM56-201ENST00000370203 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
TMEM56-201ENST00000370203 KRTAP19-2Q3LHN2 52 aa3.84□□□□□ -1.79
TMEM56-201ENST00000370203 MT3P25713 68 aa3.8□□□□□ -1.8
TMEM56-201ENST00000370203 MUC17Q685J3 4493 aa3.8□□□□□ -1.8
TMEM56-201ENST00000370203 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
TMEM56-201ENST00000370203 FLGP20930 4061 aaPredicted RBP3.78□□□□□ -1.8
TMEM56-201ENST00000370203 KRTAP9-6A0A140TA67 174 aa3.75□□□□□ -1.81
TMEM56-201ENST00000370203 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
TMEM56-201ENST00000370203 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
TMEM56-201ENST00000370203 EPPK1P58107 5090 aaKnown RBP3.64□□□□□ -1.83
TMEM56-201ENST00000370203 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
TMEM56-201ENST00000370203 ABCA13Q86UQ4 5058 aa3.56□□□□□ -1.84
TMEM56-201ENST00000370203 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
TMEM56-201ENST00000370203 HMCN2Q8NDA2 5059 aa3.55□□□□□ -1.84
TMEM56-201ENST00000370203 FAT4Q6V0I7 4981 aa3.54□□□□□ -1.84
TMEM56-201ENST00000370203 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
TMEM56-201ENST00000370203 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
TMEM56-201ENST00000370203 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
TMEM56-201ENST00000370203 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
TMEM56-201ENST00000370203 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
TMEM56-201ENST00000370203 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
TMEM56-201ENST00000370203 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
TMEM56-201ENST00000370203 LCE2AQ5TA79 106 aaPredicted RBP3.51□□□□□ -1.85
TMEM56-201ENST00000370203 MT1AP04731 61 aa3.51□□□□□ -1.85
TMEM56-201ENST00000370203 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
TMEM56-201ENST00000370203 MUC2Q02817 5179 aa3.5□□□□□ -1.85
TMEM56-201ENST00000370203 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
TMEM56-201ENST00000370203 UBR4Q5T4S7 5183 aa3.43□□□□□ -1.86
TMEM56-201ENST00000370203 RNF213Q63HN8 5207 aa3.39□□□□□ -1.87
TMEM56-201ENST00000370203 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
TMEM56-201ENST00000370203 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
TMEM56-201ENST00000370203 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
TMEM56-201ENST00000370203 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
TMEM56-201ENST00000370203 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
TMEM56-201ENST00000370203 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
TMEM56-201ENST00000370203 KRTAP2-2Q9BYT5 123 aa3.23□□□□□ -1.89
TMEM56-201ENST00000370203 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
TMEM56-201ENST00000370203 KMT2DO14686 5537 aa3.15□□□□□ -1.91
TMEM56-201ENST00000370203 FCGBPQ9Y6R7 5405 aaPredicted RBP3.03□□□□□ -1.92
TMEM56-201ENST00000370203 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
TMEM56-201ENST00000370203 DSTQ03001 7570 aaKnown RBP3□□□□□ -1.93
TMEM56-201ENST00000370203 KRTAP4-6Q9BYQ5 205 aa2.98□□□□□ -1.93
TMEM56-201ENST00000370203 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
TMEM56-201ENST00000370203 USH2AO75445 5202 aa2.97□□□□□ -1.93
TMEM56-201ENST00000370203 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
TMEM56-201ENST00000370203 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
TMEM56-201ENST00000370203 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
TMEM56-201ENST00000370203 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.94
TMEM56-201ENST00000370203 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.94
TMEM56-201ENST00000370203 SSPOA2VEC9 5147 aa2.85□□□□□ -1.95
TMEM56-201ENST00000370203 NEBP20929 6669 aa2.81□□□□□ -1.96
TMEM56-201ENST00000370203 MUC12Q9UKN1 5478 aa2.64□□□□□ -1.99
TMEM56-201ENST00000370203 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
TMEM56-201ENST00000370203 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
TMEM56-201ENST00000370203 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
TMEM56-201ENST00000370203 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
TMEM56-201ENST00000370203 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
TMEM56-201ENST00000370203 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
TMEM56-201ENST00000370203 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
TMEM56-201ENST00000370203 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
TMEM56-201ENST00000370203 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
TMEM56-201ENST00000370203 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
TMEM56-201ENST00000370203 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
TMEM56-201ENST00000370203 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
TMEM56-201ENST00000370203 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
TMEM56-201ENST00000370203 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
TMEM56-201ENST00000370203 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
TMEM56-201ENST00000370203 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
TMEM56-201ENST00000370203 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
TMEM56-201ENST00000370203 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
TMEM56-201ENST00000370203 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
TMEM56-201ENST00000370203 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
TMEM56-201ENST00000370203 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
TMEM56-201ENST00000370203 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
TMEM56-201ENST00000370203 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 58.3 ms