RNA–Protein interactions for RNA: ENST00000370056.8

VAV3-202, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAV3, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-202ENST00000370056 HMCN2Q8NDA2 5059 aa6.86□□□□□ -1.31
VAV3-202ENST00000370056 MT1MQ8N339 61 aa6.85□□□□□ -1.31
VAV3-202ENST00000370056 LCE2AQ5TA79 106 aaPredicted RBP6.8□□□□□ -1.32
VAV3-202ENST00000370056 SYNE1Q8NF91 8797 aaKnown RBP6.76□□□□□ -1.33
VAV3-202ENST00000370056 KRTAP19-7Q3SYF9 63 aa6.75□□□□□ -1.33
VAV3-202ENST00000370056 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.34
VAV3-202ENST00000370056 KRTAP4-3Q9BYR4 195 aa6.63□□□□□ -1.35
VAV3-202ENST00000370056 FSIP2Q5CZC0 6907 aa6.62□□□□□ -1.35
VAV3-202ENST00000370056 LCE2DQ5TA82 110 aaPredicted RBP6.51□□□□□ -1.37
VAV3-202ENST00000370056 KRTAP9-2Q9BYQ4 174 aa6.51□□□□□ -1.37
VAV3-202ENST00000370056 MT3P25713 68 aa6.5□□□□□ -1.37
VAV3-202ENST00000370056 KRTAP2-3P0C7H8 128 aa6.47□□□□□ -1.37
VAV3-202ENST00000370056 KRTAP2-4Q9BYR9 128 aa6.47□□□□□ -1.37
VAV3-202ENST00000370056 KRTAP2-1Q9BYU5 128 aa6.47□□□□□ -1.37
VAV3-202ENST00000370056 MUC2Q02817 5179 aa6.43□□□□□ -1.38
VAV3-202ENST00000370056 MT1AP04731 61 aa6.36□□□□□ -1.39
VAV3-202ENST00000370056 PRM1P04553 51 aa6.31□□□□□ -1.4
VAV3-202ENST00000370056 KRTAP9-6A8MVA2 160 aa6.28□□□□□ -1.4
VAV3-202ENST00000370056 MT4P47944 62 aa6.22□□□□□ -1.41
VAV3-202ENST00000370056 KRTAP9-6A0A140TA67 174 aa6.14□□□□□ -1.43
VAV3-202ENST00000370056 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
VAV3-202ENST00000370056 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
VAV3-202ENST00000370056 LCE1AQ5T7P2 110 aa6.07□□□□□ -1.44
VAV3-202ENST00000370056 OBSCNQ5VST9 7968 aa6□□□□□ -1.45
VAV3-202ENST00000370056 KRTAP6-1Q3LI64 71 aa6□□□□□ -1.45
VAV3-202ENST00000370056 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
VAV3-202ENST00000370056 SYNE2Q8WXH0 6885 aaKnown RBP5.94□□□□□ -1.46
VAV3-202ENST00000370056 LCE1BQ5T7P3 118 aa5.94□□□□□ -1.46
VAV3-202ENST00000370056 USH2AO75445 5202 aa5.91□□□□□ -1.46
VAV3-202ENST00000370056 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
VAV3-202ENST00000370056 KRTAP9-4Q9BYQ2 154 aa5.84□□□□□ -1.47
VAV3-202ENST00000370056 KRTAP9-7A8MTY7 169 aa5.83□□□□□ -1.48
VAV3-202ENST00000370056 FCGBPQ9Y6R7 5405 aaPredicted RBP5.8□□□□□ -1.48
VAV3-202ENST00000370056 KRTAP6-2Q3LI66 62 aa5.8□□□□□ -1.48
VAV3-202ENST00000370056 KRTAP20-1Q3LI63 56 aa5.71□□□□□ -1.49
VAV3-202ENST00000370056 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.65□□□□□ -1.5
VAV3-202ENST00000370056 KMT2DO14686 5537 aa5.63□□□□□ -1.51
VAV3-202ENST00000370056 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
VAV3-202ENST00000370056 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.51
VAV3-202ENST00000370056 KRTAP2-2Q9BYT5 123 aa5.43□□□□□ -1.54
VAV3-202ENST00000370056 MACF1Q9UPN3 7388 aaKnown RBP5.42□□□□□ -1.54
VAV3-202ENST00000370056 SSPOA2VEC9 5147 aa5.35□□□□□ -1.55
VAV3-202ENST00000370056 KRTAP5-9P26371 169 aa5.32□□□□□ -1.56
VAV3-202ENST00000370056 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
VAV3-202ENST00000370056 MDN1Q9NU22 5596 aa5.06□□□□□ -1.6
VAV3-202ENST00000370056 NEBP20929 6669 aa5.01□□□□□ -1.61
VAV3-202ENST00000370056 KRTAP4-6Q9BYQ5 205 aa4.91□□□□□ -1.62
VAV3-202ENST00000370056 KRTAP20-2Q3LI61 65 aa4.87□□□□□ -1.63
VAV3-202ENST00000370056 LCE1CQ5T751 118 aa4.85□□□□□ -1.63
VAV3-202ENST00000370056 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
VAV3-202ENST00000370056 LCE1FQ5T754 118 aa4.85□□□□□ -1.63
VAV3-202ENST00000370056 MUC19Q7Z5P9 8384 aa4.81□□□□□ -1.64
VAV3-202ENST00000370056 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
VAV3-202ENST00000370056 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
VAV3-202ENST00000370056 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
VAV3-202ENST00000370056 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.66
VAV3-202ENST00000370056 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
VAV3-202ENST00000370056 KRTAP4-4Q9BYR3 166 aa4.22□□□□□ -1.73
VAV3-202ENST00000370056 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
VAV3-202ENST00000370056 KRTAP4-12Q9BQ66 201 aa4.12□□□□□ -1.75
VAV3-202ENST00000370056 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
VAV3-202ENST00000370056 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
VAV3-202ENST00000370056 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
VAV3-202ENST00000370056 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.79
VAV3-202ENST00000370056 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
VAV3-202ENST00000370056 KRTAP5-10Q6L8G5 202 aa3.74□□□□□ -1.81
VAV3-202ENST00000370056 KRTAP5-8O75690 187 aa3.59□□□□□ -1.83
VAV3-202ENST00000370056 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
VAV3-202ENST00000370056 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
VAV3-202ENST00000370056 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
VAV3-202ENST00000370056 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
VAV3-202ENST00000370056 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
VAV3-202ENST00000370056 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
VAV3-202ENST00000370056 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
VAV3-202ENST00000370056 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
VAV3-202ENST00000370056 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
VAV3-202ENST00000370056 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 65.1 ms