RNA–Protein interactions for RNA: ENST00000369682.4

PLXNA3-201, Transcript of plexin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA3, Length 10,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-201ENST00000369682 LCE1DQ5T752 114 aa3.4□□□□□ -1.86
PLXNA3-201ENST00000369682 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
PLXNA3-201ENST00000369682 LCE2DQ5TA82 110 aaPredicted RBP3.38□□□□□ -1.87
PLXNA3-201ENST00000369682 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
PLXNA3-201ENST00000369682 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
PLXNA3-201ENST00000369682 BIRC6Q9NR09 4857 aa3.37□□□□□ -1.87
PLXNA3-201ENST00000369682 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
PLXNA3-201ENST00000369682 KRTAP19-6Q3LI70 58 aa3.36□□□□□ -1.87
PLXNA3-201ENST00000369682 HERC1Q15751 4861 aa3.35□□□□□ -1.87
PLXNA3-201ENST00000369682 KRTAP9-7A8MTY7 169 aa3.31□□□□□ -1.88
PLXNA3-201ENST00000369682 KRTAP9-2Q9BYQ4 174 aa3.3□□□□□ -1.88
PLXNA3-201ENST00000369682 MT3P25713 68 aa3.29□□□□□ -1.88
PLXNA3-201ENST00000369682 ABCA13Q86UQ4 5058 aa3.28□□□□□ -1.88
PLXNA3-201ENST00000369682 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
PLXNA3-201ENST00000369682 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
PLXNA3-201ENST00000369682 LCE2AQ5TA79 106 aaPredicted RBP3.22□□□□□ -1.89
PLXNA3-201ENST00000369682 RNF213Q63HN8 5207 aa3.2□□□□□ -1.9
PLXNA3-201ENST00000369682 MT1AP04731 61 aa3.19□□□□□ -1.9
PLXNA3-201ENST00000369682 UBR4Q5T4S7 5183 aa3.18□□□□□ -1.9
PLXNA3-201ENST00000369682 MUC2Q02817 5179 aa3.16□□□□□ -1.9
PLXNA3-201ENST00000369682 EPPK1P58107 5090 aaKnown RBP3.16□□□□□ -1.9
PLXNA3-201ENST00000369682 HMCN2Q8NDA2 5059 aa3.12□□□□□ -1.91
PLXNA3-201ENST00000369682 LCE5AQ5TCM9 118 aa3.07□□□□□ -1.92
PLXNA3-201ENST00000369682 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
PLXNA3-201ENST00000369682 SYNE2Q8WXH0 6885 aaKnown RBP3.04□□□□□ -1.92
PLXNA3-201ENST00000369682 KRTAP9-6A0A140TA67 174 aa3□□□□□ -1.93
PLXNA3-201ENST00000369682 FSIP2Q5CZC0 6907 aa2.95□□□□□ -1.94
PLXNA3-201ENST00000369682 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
PLXNA3-201ENST00000369682 KMT2DO14686 5537 aa2.94□□□□□ -1.94
PLXNA3-201ENST00000369682 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
PLXNA3-201ENST00000369682 LCE1AQ5T7P2 110 aa2.92□□□□□ -1.94
PLXNA3-201ENST00000369682 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
PLXNA3-201ENST00000369682 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
PLXNA3-201ENST00000369682 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
PLXNA3-201ENST00000369682 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.85□□□□□ -1.95
PLXNA3-201ENST00000369682 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
PLXNA3-201ENST00000369682 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
PLXNA3-201ENST00000369682 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
PLXNA3-201ENST00000369682 USH2AO75445 5202 aa2.79□□□□□ -1.96
PLXNA3-201ENST00000369682 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
PLXNA3-201ENST00000369682 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
PLXNA3-201ENST00000369682 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
PLXNA3-201ENST00000369682 FCGBPQ9Y6R7 5405 aaPredicted RBP2.63□□□□□ -1.99
PLXNA3-201ENST00000369682 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
PLXNA3-201ENST00000369682 KRTAP4-6Q9BYQ5 205 aa2.59□□□□□ -1.99
PLXNA3-201ENST00000369682 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
PLXNA3-201ENST00000369682 KRTAP4-12Q9BQ66 201 aa2.5□□□□□ -2.01
PLXNA3-201ENST00000369682 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
PLXNA3-201ENST00000369682 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
PLXNA3-201ENST00000369682 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
PLXNA3-201ENST00000369682 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
PLXNA3-201ENST00000369682 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
PLXNA3-201ENST00000369682 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
PLXNA3-201ENST00000369682 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
PLXNA3-201ENST00000369682 DSTQ03001 7570 aaKnown RBP2.23□□□□□ -2.05
PLXNA3-201ENST00000369682 NEBP20929 6669 aa2.22□□□□□ -2.05
PLXNA3-201ENST00000369682 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
PLXNA3-201ENST00000369682 KRTAP5-3Q6L8H2 238 aa1.94□□□□□ -2.1
PLXNA3-201ENST00000369682 MACF1Q9UPN3 7388 aaKnown RBP1.91□□□□□ -2.1
PLXNA3-201ENST00000369682 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
PLXNA3-201ENST00000369682 GPR98Q8WXG9 6306 aa1.85□□□□□ -2.11
PLXNA3-201ENST00000369682 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
PLXNA3-201ENST00000369682 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
PLXNA3-201ENST00000369682 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
PLXNA3-201ENST00000369682 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
PLXNA3-201ENST00000369682 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
PLXNA3-201ENST00000369682 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
PLXNA3-201ENST00000369682 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
PLXNA3-201ENST00000369682 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
PLXNA3-201ENST00000369682 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
PLXNA3-201ENST00000369682 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
PLXNA3-201ENST00000369682 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
PLXNA3-201ENST00000369682 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
PLXNA3-201ENST00000369682 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
PLXNA3-201ENST00000369682 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
PLXNA3-201ENST00000369682 KRTAP5-7Q6L8G8 165 aa1.29□□□□□ -2.2
PLXNA3-201ENST00000369682 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 73.5 ms