RNA–Protein interactions for RNA: ENST00000369558.5

HIPK1-205, Transcript of homeodomain interacting protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK1, Length 8,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-205ENST00000369558 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
HIPK1-205ENST00000369558 MT1MQ8N339 61 aa4.27□□□□□ -1.73
HIPK1-205ENST00000369558 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
HIPK1-205ENST00000369558 MT4P47944 62 aa4.26□□□□□ -1.73
HIPK1-205ENST00000369558 LCE2DQ5TA82 110 aaPredicted RBP4.23□□□□□ -1.73
HIPK1-205ENST00000369558 PRM1P04553 51 aa4.21□□□□□ -1.73
HIPK1-205ENST00000369558 EPPK1P58107 5090 aaKnown RBP4.21□□□□□ -1.74
HIPK1-205ENST00000369558 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
HIPK1-205ENST00000369558 ABCA13Q86UQ4 5058 aa4.14□□□□□ -1.75
HIPK1-205ENST00000369558 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
HIPK1-205ENST00000369558 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
HIPK1-205ENST00000369558 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
HIPK1-205ENST00000369558 FAT4Q6V0I7 4981 aa4.1□□□□□ -1.75
HIPK1-205ENST00000369558 MT3P25713 68 aa4.08□□□□□ -1.76
HIPK1-205ENST00000369558 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
HIPK1-205ENST00000369558 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
HIPK1-205ENST00000369558 KMT2DO14686 5537 aa4.01□□□□□ -1.77
HIPK1-205ENST00000369558 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
HIPK1-205ENST00000369558 RNF213Q63HN8 5207 aa3.97□□□□□ -1.77
HIPK1-205ENST00000369558 KRTAP2-3P0C7H8 128 aa3.97□□□□□ -1.77
HIPK1-205ENST00000369558 KRTAP2-4Q9BYR9 128 aa3.97□□□□□ -1.77
HIPK1-205ENST00000369558 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
HIPK1-205ENST00000369558 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
HIPK1-205ENST00000369558 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.78
HIPK1-205ENST00000369558 FCGBPQ9Y6R7 5405 aaPredicted RBP3.89□□□□□ -1.79
HIPK1-205ENST00000369558 MT1AP04731 61 aa3.86□□□□□ -1.79
HIPK1-205ENST00000369558 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
HIPK1-205ENST00000369558 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
HIPK1-205ENST00000369558 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
HIPK1-205ENST00000369558 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
HIPK1-205ENST00000369558 KRTAP9-6A0A140TA67 174 aa3.72□□□□□ -1.81
HIPK1-205ENST00000369558 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
HIPK1-205ENST00000369558 USH2AO75445 5202 aa3.62□□□□□ -1.83
HIPK1-205ENST00000369558 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
HIPK1-205ENST00000369558 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
HIPK1-205ENST00000369558 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
HIPK1-205ENST00000369558 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
HIPK1-205ENST00000369558 KRTAP6-3Q3LI67 103 aa3.48□□□□□ -1.85
HIPK1-205ENST00000369558 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
HIPK1-205ENST00000369558 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
HIPK1-205ENST00000369558 LCE1CQ5T751 118 aa3.4□□□□□ -1.86
HIPK1-205ENST00000369558 LCE1EQ5T753 118 aa3.4□□□□□ -1.86
HIPK1-205ENST00000369558 LCE1FQ5T754 118 aa3.4□□□□□ -1.86
HIPK1-205ENST00000369558 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
HIPK1-205ENST00000369558 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
HIPK1-205ENST00000369558 SSPOA2VEC9 5147 aa3.3□□□□□ -1.88
HIPK1-205ENST00000369558 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.9
HIPK1-205ENST00000369558 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
HIPK1-205ENST00000369558 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
HIPK1-205ENST00000369558 NEBP20929 6669 aa3.06□□□□□ -1.92
HIPK1-205ENST00000369558 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
HIPK1-205ENST00000369558 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
HIPK1-205ENST00000369558 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
HIPK1-205ENST00000369558 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
HIPK1-205ENST00000369558 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
HIPK1-205ENST00000369558 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
HIPK1-205ENST00000369558 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
HIPK1-205ENST00000369558 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
HIPK1-205ENST00000369558 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
HIPK1-205ENST00000369558 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
HIPK1-205ENST00000369558 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
HIPK1-205ENST00000369558 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.02
HIPK1-205ENST00000369558 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
HIPK1-205ENST00000369558 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
HIPK1-205ENST00000369558 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
HIPK1-205ENST00000369558 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
HIPK1-205ENST00000369558 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.08
HIPK1-205ENST00000369558 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.08
HIPK1-205ENST00000369558 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
HIPK1-205ENST00000369558 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
HIPK1-205ENST00000369558 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
HIPK1-205ENST00000369558 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
HIPK1-205ENST00000369558 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
HIPK1-205ENST00000369558 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
HIPK1-205ENST00000369558 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
HIPK1-205ENST00000369558 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
HIPK1-205ENST00000369558 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms