RNA–Protein interactions for RNA: ENST00000369486.7

IGSF3-203, Transcript of immunoglobulin superfamily member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene IGSF3, Length 7,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGSF3-203ENST00000369486 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
IGSF3-203ENST00000369486 KRTAP19-6Q3LI70 58 aa3.78□□□□□ -1.8
IGSF3-203ENST00000369486 FAT4Q6V0I7 4981 aa3.77□□□□□ -1.81
IGSF3-203ENST00000369486 MT1MQ8N339 61 aa3.76□□□□□ -1.81
IGSF3-203ENST00000369486 HMCN2Q8NDA2 5059 aa3.74□□□□□ -1.81
IGSF3-203ENST00000369486 LCE2AQ5TA79 106 aaPredicted RBP3.72□□□□□ -1.81
IGSF3-203ENST00000369486 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
IGSF3-203ENST00000369486 KRTAP9-6A0A140TA67 174 aa3.68□□□□□ -1.82
IGSF3-203ENST00000369486 SYNE2Q8WXH0 6885 aaKnown RBP3.67□□□□□ -1.82
IGSF3-203ENST00000369486 MUC2Q02817 5179 aa3.65□□□□□ -1.83
IGSF3-203ENST00000369486 UBR4Q5T4S7 5183 aa3.64□□□□□ -1.83
IGSF3-203ENST00000369486 RNF213Q63HN8 5207 aa3.62□□□□□ -1.83
IGSF3-203ENST00000369486 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
IGSF3-203ENST00000369486 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
IGSF3-203ENST00000369486 MT3P25713 68 aa3.56□□□□□ -1.84
IGSF3-203ENST00000369486 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
IGSF3-203ENST00000369486 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
IGSF3-203ENST00000369486 PRM1P04553 51 aa3.5□□□□□ -1.85
IGSF3-203ENST00000369486 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
IGSF3-203ENST00000369486 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
IGSF3-203ENST00000369486 MT1AP04731 61 aa3.39□□□□□ -1.87
IGSF3-203ENST00000369486 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
IGSF3-203ENST00000369486 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
IGSF3-203ENST00000369486 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
IGSF3-203ENST00000369486 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.37□□□□□ -1.87
IGSF3-203ENST00000369486 LCE5AQ5TCM9 118 aa3.34□□□□□ -1.88
IGSF3-203ENST00000369486 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
IGSF3-203ENST00000369486 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
IGSF3-203ENST00000369486 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
IGSF3-203ENST00000369486 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
IGSF3-203ENST00000369486 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
IGSF3-203ENST00000369486 KMT2DO14686 5537 aa3.28□□□□□ -1.88
IGSF3-203ENST00000369486 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
IGSF3-203ENST00000369486 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
IGSF3-203ENST00000369486 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.9
IGSF3-203ENST00000369486 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
IGSF3-203ENST00000369486 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
IGSF3-203ENST00000369486 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
IGSF3-203ENST00000369486 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
IGSF3-203ENST00000369486 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
IGSF3-203ENST00000369486 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.92
IGSF3-203ENST00000369486 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
IGSF3-203ENST00000369486 USH2AO75445 5202 aa3.08□□□□□ -1.92
IGSF3-203ENST00000369486 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.93
IGSF3-203ENST00000369486 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
IGSF3-203ENST00000369486 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.95
IGSF3-203ENST00000369486 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
IGSF3-203ENST00000369486 KRTAP5-9P26371 169 aa2.83□□□□□ -1.96
IGSF3-203ENST00000369486 NEBP20929 6669 aa2.83□□□□□ -1.96
IGSF3-203ENST00000369486 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
IGSF3-203ENST00000369486 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
IGSF3-203ENST00000369486 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
IGSF3-203ENST00000369486 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
IGSF3-203ENST00000369486 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
IGSF3-203ENST00000369486 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
IGSF3-203ENST00000369486 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
IGSF3-203ENST00000369486 MDN1Q9NU22 5596 aa2.49□□□□□ -2.01
IGSF3-203ENST00000369486 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
IGSF3-203ENST00000369486 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.05
IGSF3-203ENST00000369486 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
IGSF3-203ENST00000369486 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
IGSF3-203ENST00000369486 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
IGSF3-203ENST00000369486 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
IGSF3-203ENST00000369486 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
IGSF3-203ENST00000369486 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
IGSF3-203ENST00000369486 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
IGSF3-203ENST00000369486 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
IGSF3-203ENST00000369486 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
IGSF3-203ENST00000369486 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
IGSF3-203ENST00000369486 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
IGSF3-203ENST00000369486 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
IGSF3-203ENST00000369486 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
IGSF3-203ENST00000369486 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
IGSF3-203ENST00000369486 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
IGSF3-203ENST00000369486 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
IGSF3-203ENST00000369486 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
IGSF3-203ENST00000369486 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 62.7 ms