RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
SCAF11-202ENST00000369367 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
SCAF11-202ENST00000369367 KRTAP9-7A8MTY7 169 aa3.1□□□□□ -1.91
SCAF11-202ENST00000369367 MT4P47944 62 aa3.09□□□□□ -1.91
SCAF11-202ENST00000369367 TNXBP22105 4242 aa3.08□□□□□ -1.92
SCAF11-202ENST00000369367 KMT2CQ8NEZ4 4911 aaKnown RBP3.08□□□□□ -1.92
SCAF11-202ENST00000369367 LPAP08519 4548 aa3.04□□□□□ -1.92
SCAF11-202ENST00000369367 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
SCAF11-202ENST00000369367 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
SCAF11-202ENST00000369367 KRTAP4-7Q9BYR0 210 aa3.01□□□□□ -1.93
SCAF11-202ENST00000369367 RNF213Q63HN8 5207 aa3□□□□□ -1.93
SCAF11-202ENST00000369367 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
SCAF11-202ENST00000369367 MT1AP04731 61 aa2.98□□□□□ -1.93
SCAF11-202ENST00000369367 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.94
SCAF11-202ENST00000369367 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
SCAF11-202ENST00000369367 FAT4Q6V0I7 4981 aa2.95□□□□□ -1.94
SCAF11-202ENST00000369367 LCE4AQ5TA78 99 aa2.94□□□□□ -1.94
SCAF11-202ENST00000369367 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
SCAF11-202ENST00000369367 KRTAP2-1Q9BYU5 128 aa2.92□□□□□ -1.94
SCAF11-202ENST00000369367 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
SCAF11-202ENST00000369367 LCE1DQ5T752 114 aa2.9□□□□□ -1.95
SCAF11-202ENST00000369367 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
SCAF11-202ENST00000369367 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
SCAF11-202ENST00000369367 LOC100996750A0A140TA64 210 aa2.85□□□□□ -1.95
SCAF11-202ENST00000369367 SYNE2Q8WXH0 6885 aaKnown RBP2.84□□□□□ -1.96
SCAF11-202ENST00000369367 HMCN2Q8NDA2 5059 aa2.82□□□□□ -1.96
SCAF11-202ENST00000369367 LCE5AQ5TCM9 118 aa2.82□□□□□ -1.96
SCAF11-202ENST00000369367 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
SCAF11-202ENST00000369367 MUC2Q02817 5179 aa2.76□□□□□ -1.97
SCAF11-202ENST00000369367 PRM1P04553 51 aa2.73□□□□□ -1.97
SCAF11-202ENST00000369367 KRTAP9-4Q9BYQ2 154 aa2.73□□□□□ -1.97
SCAF11-202ENST00000369367 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
SCAF11-202ENST00000369367 KRTAP4-9Q9BYQ8 210 aa2.66□□□□□ -1.98
SCAF11-202ENST00000369367 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
SCAF11-202ENST00000369367 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
SCAF11-202ENST00000369367 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
SCAF11-202ENST00000369367 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
SCAF11-202ENST00000369367 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
SCAF11-202ENST00000369367 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
SCAF11-202ENST00000369367 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
SCAF11-202ENST00000369367 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
SCAF11-202ENST00000369367 NEBP20929 6669 aa2.48□□□□□ -2.01
SCAF11-202ENST00000369367 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
SCAF11-202ENST00000369367 USH2AO75445 5202 aa2.42□□□□□ -2.02
SCAF11-202ENST00000369367 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
SCAF11-202ENST00000369367 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
SCAF11-202ENST00000369367 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
SCAF11-202ENST00000369367 DSTQ03001 7570 aaKnown RBP2.33□□□□□ -2.04
SCAF11-202ENST00000369367 FCGBPQ9Y6R7 5405 aaPredicted RBP2.3□□□□□ -2.04
SCAF11-202ENST00000369367 KRTAP4-6Q9BYQ5 205 aa2.29□□□□□ -2.04
SCAF11-202ENST00000369367 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.05
SCAF11-202ENST00000369367 KMT2DO14686 5537 aa2.27□□□□□ -2.05
SCAF11-202ENST00000369367 MDN1Q9NU22 5596 aa2.21□□□□□ -2.05
SCAF11-202ENST00000369367 KRTAP4-11Q9BYQ6 195 aa2.16□□□□□ -2.06
SCAF11-202ENST00000369367 MUC12Q9UKN1 5478 aa2.05□□□□□ -2.08
SCAF11-202ENST00000369367 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
SCAF11-202ENST00000369367 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.08
SCAF11-202ENST00000369367 KRTAP5-3Q6L8H2 238 aa2.01□□□□□ -2.09
SCAF11-202ENST00000369367 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
SCAF11-202ENST00000369367 KRTAP4-12Q9BQ66 201 aa1.94□□□□□ -2.1
SCAF11-202ENST00000369367 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
SCAF11-202ENST00000369367 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
SCAF11-202ENST00000369367 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
SCAF11-202ENST00000369367 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
SCAF11-202ENST00000369367 KRTAP5-8O75690 187 aa1.78□□□□□ -2.13
SCAF11-202ENST00000369367 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
SCAF11-202ENST00000369367 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
SCAF11-202ENST00000369367 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
SCAF11-202ENST00000369367 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
SCAF11-202ENST00000369367 KRTAP5-11Q6L8G4 156 aa1.6□□□□□ -2.15
SCAF11-202ENST00000369367 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
SCAF11-202ENST00000369367 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
SCAF11-202ENST00000369367 KRTAP5-1Q6L8H4 278 aa1.5□□□□□ -2.17
SCAF11-202ENST00000369367 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
SCAF11-202ENST00000369367 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
SCAF11-202ENST00000369367 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
SCAF11-202ENST00000369367 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 15.6 ms