RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 KRTAP9-7A8MTY7 169 aa2.21□□□□□ -2.06
SPTA1-201ENST00000368147 MT1EP04732 61 aa2.2□□□□□ -2.06
SPTA1-201ENST00000368147 KRTAP4-9Q9BYQ8 210 aa2.2□□□□□ -2.06
SPTA1-201ENST00000368147 SYNE2Q8WXH0 6885 aaKnown RBP2.19□□□□□ -2.06
SPTA1-201ENST00000368147 MT1MQ8N339 61 aa2.17□□□□□ -2.06
SPTA1-201ENST00000368147 KRTAP2-3P0C7H8 128 aa2.11□□□□□ -2.07
SPTA1-201ENST00000368147 KRTAP2-4Q9BYR9 128 aa2.11□□□□□ -2.07
SPTA1-201ENST00000368147 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
SPTA1-201ENST00000368147 LCE1EQ5T753 118 aa2.09□□□□□ -2.07
SPTA1-201ENST00000368147 LCE1FQ5T754 118 aa2.09□□□□□ -2.07
SPTA1-201ENST00000368147 LCE1AQ5T7P2 110 aa2.09□□□□□ -2.07
SPTA1-201ENST00000368147 KRTAP19-2Q3LHN2 52 aa2.08□□□□□ -2.08
SPTA1-201ENST00000368147 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.04□□□□□ -2.08
SPTA1-201ENST00000368147 KMT2CQ8NEZ4 4911 aaKnown RBP2.04□□□□□ -2.08
SPTA1-201ENST00000368147 BIRC6Q9NR09 4857 aa2.04□□□□□ -2.08
SPTA1-201ENST00000368147 KRTAP6-3Q3LI67 103 aa2.01□□□□□ -2.09
SPTA1-201ENST00000368147 KRTAP2-2Q9BYT5 123 aa2□□□□□ -2.09
SPTA1-201ENST00000368147 KRTAP2-1Q9BYU5 128 aa2□□□□□ -2.09
SPTA1-201ENST00000368147 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
SPTA1-201ENST00000368147 LCE2AQ5TA79 106 aaPredicted RBP1.99□□□□□ -2.09
SPTA1-201ENST00000368147 RYR2Q92736 4967 aa1.99□□□□□ -2.09
SPTA1-201ENST00000368147 PCLOQ9Y6V0 5065 aa1.97□□□□□ -2.09
SPTA1-201ENST00000368147 HERC2O95714 4834 aa1.97□□□□□ -2.09
SPTA1-201ENST00000368147 MT1AP04731 61 aa1.93□□□□□ -2.1
SPTA1-201ENST00000368147 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
SPTA1-201ENST00000368147 KRTAP9-9Q9BYP9 154 aa1.92□□□□□ -2.1
SPTA1-201ENST00000368147 KRTAP19-7Q3SYF9 63 aa1.91□□□□□ -2.1
SPTA1-201ENST00000368147 FSIP2Q5CZC0 6907 aa1.91□□□□□ -2.1
SPTA1-201ENST00000368147 HMCN2Q8NDA2 5059 aa1.88□□□□□ -2.11
SPTA1-201ENST00000368147 KRTAP9-4Q9BYQ2 154 aa1.88□□□□□ -2.11
SPTA1-201ENST00000368147 EPPK1P58107 5090 aaKnown RBP1.86□□□□□ -2.11
SPTA1-201ENST00000368147 KIAA1109Q2LD37 5005 aa1.84□□□□□ -2.11
SPTA1-201ENST00000368147 ABCA13Q86UQ4 5058 aa1.82□□□□□ -2.12
SPTA1-201ENST00000368147 KRTAP4-6Q9BYQ5 205 aa1.74□□□□□ -2.13
SPTA1-201ENST00000368147 KRTAP9-6A8MVA2 160 aa1.73□□□□□ -2.13
SPTA1-201ENST00000368147 KRTAP20-2Q3LI61 65 aa1.72□□□□□ -2.13
SPTA1-201ENST00000368147 FAT4Q6V0I7 4981 aa1.71□□□□□ -2.13
SPTA1-201ENST00000368147 RNF213Q63HN8 5207 aa1.71□□□□□ -2.13
SPTA1-201ENST00000368147 UBR4Q5T4S7 5183 aa1.7□□□□□ -2.14
SPTA1-201ENST00000368147 KRTAP4-12Q9BQ66 201 aa1.69□□□□□ -2.14
SPTA1-201ENST00000368147 KRTAP4-2Q9BYR5 136 aa1.69□□□□□ -2.14
SPTA1-201ENST00000368147 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
SPTA1-201ENST00000368147 MUC2Q02817 5179 aa1.67□□□□□ -2.14
SPTA1-201ENST00000368147 KMT2DO14686 5537 aa1.66□□□□□ -2.14
SPTA1-201ENST00000368147 KRTAP4-11Q9BYQ6 195 aa1.65□□□□□ -2.15
SPTA1-201ENST00000368147 SYNE1Q8NF91 8797 aaKnown RBP1.64□□□□□ -2.15
SPTA1-201ENST00000368147 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
SPTA1-201ENST00000368147 OBSCNQ5VST9 7968 aa1.56□□□□□ -2.16
SPTA1-201ENST00000368147 NEBP20929 6669 aa1.54□□□□□ -2.16
SPTA1-201ENST00000368147 MACF1Q9UPN3 7388 aaKnown RBP1.53□□□□□ -2.16
SPTA1-201ENST00000368147 KRTAP5-9P26371 169 aa1.53□□□□□ -2.17
SPTA1-201ENST00000368147 USH2AO75445 5202 aa1.5□□□□□ -2.17
SPTA1-201ENST00000368147 DSTQ03001 7570 aaKnown RBP1.5□□□□□ -2.17
SPTA1-201ENST00000368147 SSPOA2VEC9 5147 aa1.47□□□□□ -2.17
SPTA1-201ENST00000368147 KRTAP5-4Q6L8H1 288 aa1.44□□□□□ -2.18
SPTA1-201ENST00000368147 MDN1Q9NU22 5596 aa1.35□□□□□ -2.19
SPTA1-201ENST00000368147 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
SPTA1-201ENST00000368147 KRTAP5-5Q701N2 237 aaPredicted RBP1.35□□□□□ -2.19
SPTA1-201ENST00000368147 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.19
SPTA1-201ENST00000368147 FCGBPQ9Y6R7 5405 aaPredicted RBP1.34□□□□□ -2.2
SPTA1-201ENST00000368147 KRTAP5-3Q6L8H2 238 aa1.31□□□□□ -2.2
SPTA1-201ENST00000368147 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
SPTA1-201ENST00000368147 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
SPTA1-201ENST00000368147 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
SPTA1-201ENST00000368147 MUC12Q9UKN1 5478 aa1.25□□□□□ -2.21
SPTA1-201ENST00000368147 KRTAP5-8O75690 187 aa1.23□□□□□ -2.21
SPTA1-201ENST00000368147 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
SPTA1-201ENST00000368147 MUC5ACP98088 5654 aa1.14□□□□□ -2.23
SPTA1-201ENST00000368147 KRTAP5-2Q701N4 177 aa0.99□□□□□ -2.25
SPTA1-201ENST00000368147 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
SPTA1-201ENST00000368147 KRTAP5-1Q6L8H4 278 aa0.97□□□□□ -2.25
SPTA1-201ENST00000368147 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
SPTA1-201ENST00000368147 KRTAP5-11Q6L8G4 156 aa0.92□□□□□ -2.26
SPTA1-201ENST00000368147 KRTAP5-7Q6L8G8 165 aa0.89□□□□□ -2.27
SPTA1-201ENST00000368147 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
SPTA1-201ENST00000368147 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.82□□□□□ -2.28
SPTA1-201ENST00000368147 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 64.3 ms