RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
SHPRH-203ENST00000367505 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
SHPRH-203ENST00000367505 PRM1P04553 51 aa2.48□□□□□ -2.01
SHPRH-203ENST00000367505 LOC100996750A0A140TA64 210 aa2.44□□□□□ -2.02
SHPRH-203ENST00000367505 MT1AP04731 61 aa2.43□□□□□ -2.02
SHPRH-203ENST00000367505 EPPK1P58107 5090 aaKnown RBP2.42□□□□□ -2.02
SHPRH-203ENST00000367505 LCE2DQ5TA82 110 aaPredicted RBP2.42□□□□□ -2.02
SHPRH-203ENST00000367505 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
SHPRH-203ENST00000367505 LCE2AQ5TA79 106 aaPredicted RBP2.39□□□□□ -2.03
SHPRH-203ENST00000367505 HMCN2Q8NDA2 5059 aa2.39□□□□□ -2.03
SHPRH-203ENST00000367505 ABCA13Q86UQ4 5058 aa2.39□□□□□ -2.03
SHPRH-203ENST00000367505 UBR4Q5T4S7 5183 aa2.34□□□□□ -2.03
SHPRH-203ENST00000367505 RNF213Q63HN8 5207 aa2.33□□□□□ -2.04
SHPRH-203ENST00000367505 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
SHPRH-203ENST00000367505 FAT4Q6V0I7 4981 aa2.32□□□□□ -2.04
SHPRH-203ENST00000367505 MT4P47944 62 aa2.29□□□□□ -2.04
SHPRH-203ENST00000367505 LCE1AQ5T7P2 110 aa2.29□□□□□ -2.04
SHPRH-203ENST00000367505 KRTAP4-9Q9BYQ8 210 aa2.28□□□□□ -2.05
SHPRH-203ENST00000367505 LCE1DQ5T752 114 aa2.27□□□□□ -2.05
SHPRH-203ENST00000367505 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
SHPRH-203ENST00000367505 LCE5AQ5TCM9 118 aa2.25□□□□□ -2.05
SHPRH-203ENST00000367505 KRTAP9-2Q9BYQ4 174 aa2.25□□□□□ -2.05
SHPRH-203ENST00000367505 OBSCNQ5VST9 7968 aa2.24□□□□□ -2.05
SHPRH-203ENST00000367505 KRTAP6-1Q3LI64 71 aa2.23□□□□□ -2.05
SHPRH-203ENST00000367505 KRTAP9-4Q9BYQ2 154 aa2.21□□□□□ -2.06
SHPRH-203ENST00000367505 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
SHPRH-203ENST00000367505 MUC2Q02817 5179 aa2.18□□□□□ -2.06
SHPRH-203ENST00000367505 FSIP2Q5CZC0 6907 aa2.16□□□□□ -2.06
SHPRH-203ENST00000367505 KRTAP9-6A0A140TA67 174 aa2.14□□□□□ -2.07
SHPRH-203ENST00000367505 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
SHPRH-203ENST00000367505 LCE4AQ5TA78 99 aa2.12□□□□□ -2.07
SHPRH-203ENST00000367505 KRTAP9-7A8MTY7 169 aa2.11□□□□□ -2.07
SHPRH-203ENST00000367505 SYNE2Q8WXH0 6885 aaKnown RBP2.1□□□□□ -2.07
SHPRH-203ENST00000367505 KRTAP20-1Q3LI63 56 aa2.03□□□□□ -2.08
SHPRH-203ENST00000367505 KRTAP2-2Q9BYT5 123 aa2.02□□□□□ -2.09
SHPRH-203ENST00000367505 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
SHPRH-203ENST00000367505 USH2AO75445 5202 aa1.98□□□□□ -2.09
SHPRH-203ENST00000367505 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.97□□□□□ -2.09
SHPRH-203ENST00000367505 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
SHPRH-203ENST00000367505 KRTAP5-9P26371 169 aa1.91□□□□□ -2.1
SHPRH-203ENST00000367505 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
SHPRH-203ENST00000367505 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
SHPRH-203ENST00000367505 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
SHPRH-203ENST00000367505 KMT2DO14686 5537 aa1.86□□□□□ -2.11
SHPRH-203ENST00000367505 KRTAP4-11Q9BYQ6 195 aa1.8□□□□□ -2.12
SHPRH-203ENST00000367505 SSPOA2VEC9 5147 aa1.79□□□□□ -2.12
SHPRH-203ENST00000367505 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.12
SHPRH-203ENST00000367505 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
SHPRH-203ENST00000367505 KRTAP5-5Q701N2 237 aaPredicted RBP1.76□□□□□ -2.13
SHPRH-203ENST00000367505 MACF1Q9UPN3 7388 aaKnown RBP1.76□□□□□ -2.13
SHPRH-203ENST00000367505 MUC12Q9UKN1 5478 aa1.76□□□□□ -2.13
SHPRH-203ENST00000367505 KRTAP9-9Q9BYP9 154 aa1.75□□□□□ -2.13
SHPRH-203ENST00000367505 KRTAP4-6Q9BYQ5 205 aa1.74□□□□□ -2.13
SHPRH-203ENST00000367505 NEBP20929 6669 aa1.69□□□□□ -2.14
SHPRH-203ENST00000367505 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
SHPRH-203ENST00000367505 KRTAP5-4Q6L8H1 288 aa1.66□□□□□ -2.14
SHPRH-203ENST00000367505 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
SHPRH-203ENST00000367505 KRTAP4-12Q9BQ66 201 aa1.49□□□□□ -2.17
SHPRH-203ENST00000367505 KRTAP4-2Q9BYR5 136 aa1.49□□□□□ -2.17
SHPRH-203ENST00000367505 GPR98Q8WXG9 6306 aa1.49□□□□□ -2.17
SHPRH-203ENST00000367505 KRTAP5-3Q6L8H2 238 aa1.45□□□□□ -2.18
SHPRH-203ENST00000367505 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
SHPRH-203ENST00000367505 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
SHPRH-203ENST00000367505 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
SHPRH-203ENST00000367505 KRTAP5-2Q701N4 177 aa1.38□□□□□ -2.19
SHPRH-203ENST00000367505 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
SHPRH-203ENST00000367505 AHNAK2Q8IVF2 5795 aa1.31□□□□□ -2.2
SHPRH-203ENST00000367505 KRTAP5-8O75690 187 aa1.26□□□□□ -2.21
SHPRH-203ENST00000367505 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
SHPRH-203ENST00000367505 KRTAP5-1Q6L8H4 278 aa1.2□□□□□ -2.22
SHPRH-203ENST00000367505 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
SHPRH-203ENST00000367505 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.16□□□□□ -2.22
SHPRH-203ENST00000367505 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
SHPRH-203ENST00000367505 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
SHPRH-203ENST00000367505 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
SHPRH-203ENST00000367505 KRTAP5-7Q6L8G8 165 aa1.05□□□□□ -2.24
SHPRH-203ENST00000367505 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms