RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 RNF213Q63HN8 5207 aa5.35□□□□□ -1.55
SCAF8-201ENST00000367178 LCE3DQ9BYE3 92 aa5.35□□□□□ -1.55
SCAF8-201ENST00000367178 LCE2AQ5TA79 106 aaPredicted RBP5.32□□□□□ -1.56
SCAF8-201ENST00000367178 LCE2DQ5TA82 110 aaPredicted RBP5.32□□□□□ -1.56
SCAF8-201ENST00000367178 MT1MQ8N339 61 aa5.27□□□□□ -1.57
SCAF8-201ENST00000367178 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
SCAF8-201ENST00000367178 KRTAP9-6A0A140TA67 174 aa5.21□□□□□ -1.57
SCAF8-201ENST00000367178 HMCN2Q8NDA2 5059 aa5.18□□□□□ -1.58
SCAF8-201ENST00000367178 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
SCAF8-201ENST00000367178 MUC2Q02817 5179 aa5.1□□□□□ -1.59
SCAF8-201ENST00000367178 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
SCAF8-201ENST00000367178 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
SCAF8-201ENST00000367178 MT3P25713 68 aa5.07□□□□□ -1.6
SCAF8-201ENST00000367178 MT4P47944 62 aa5.04□□□□□ -1.6
SCAF8-201ENST00000367178 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.63
SCAF8-201ENST00000367178 MT1AP04731 61 aa4.87□□□□□ -1.63
SCAF8-201ENST00000367178 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.63
SCAF8-201ENST00000367178 PRM1P04553 51 aa4.83□□□□□ -1.64
SCAF8-201ENST00000367178 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
SCAF8-201ENST00000367178 KRTAP20-1Q3LI63 56 aa4.81□□□□□ -1.64
SCAF8-201ENST00000367178 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
SCAF8-201ENST00000367178 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
SCAF8-201ENST00000367178 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
SCAF8-201ENST00000367178 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
SCAF8-201ENST00000367178 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
SCAF8-201ENST00000367178 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
SCAF8-201ENST00000367178 KRTAP2-1Q9BYU5 128 aa4.75□□□□□ -1.65
SCAF8-201ENST00000367178 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
SCAF8-201ENST00000367178 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
SCAF8-201ENST00000367178 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
SCAF8-201ENST00000367178 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
SCAF8-201ENST00000367178 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
SCAF8-201ENST00000367178 USH2AO75445 5202 aa4.58□□□□□ -1.68
SCAF8-201ENST00000367178 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
SCAF8-201ENST00000367178 KRTAP2-2Q9BYT5 123 aa4.53□□□□□ -1.68
SCAF8-201ENST00000367178 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
SCAF8-201ENST00000367178 LCE4AQ5TA78 99 aa4.49□□□□□ -1.69
SCAF8-201ENST00000367178 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
SCAF8-201ENST00000367178 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.69
SCAF8-201ENST00000367178 MACF1Q9UPN3 7388 aaKnown RBP4.3□□□□□ -1.72
SCAF8-201ENST00000367178 KMT2DO14686 5537 aa4.29□□□□□ -1.72
SCAF8-201ENST00000367178 KRTAP5-9P26371 169 aa4.15□□□□□ -1.74
SCAF8-201ENST00000367178 SSPOA2VEC9 5147 aa4.1□□□□□ -1.75
SCAF8-201ENST00000367178 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
SCAF8-201ENST00000367178 NEBP20929 6669 aa4.09□□□□□ -1.75
SCAF8-201ENST00000367178 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
SCAF8-201ENST00000367178 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
SCAF8-201ENST00000367178 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
SCAF8-201ENST00000367178 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
SCAF8-201ENST00000367178 MUC19Q7Z5P9 8384 aa3.96□□□□□ -1.77
SCAF8-201ENST00000367178 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.78
SCAF8-201ENST00000367178 KRTAP4-6Q9BYQ5 205 aa3.87□□□□□ -1.79
SCAF8-201ENST00000367178 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
SCAF8-201ENST00000367178 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
SCAF8-201ENST00000367178 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
SCAF8-201ENST00000367178 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
SCAF8-201ENST00000367178 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
SCAF8-201ENST00000367178 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
SCAF8-201ENST00000367178 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
SCAF8-201ENST00000367178 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
SCAF8-201ENST00000367178 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
SCAF8-201ENST00000367178 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
SCAF8-201ENST00000367178 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
SCAF8-201ENST00000367178 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
SCAF8-201ENST00000367178 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
SCAF8-201ENST00000367178 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
SCAF8-201ENST00000367178 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
SCAF8-201ENST00000367178 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
SCAF8-201ENST00000367178 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
SCAF8-201ENST00000367178 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
SCAF8-201ENST00000367178 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
SCAF8-201ENST00000367178 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
SCAF8-201ENST00000367178 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
SCAF8-201ENST00000367178 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
SCAF8-201ENST00000367178 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
SCAF8-201ENST00000367178 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
SCAF8-201ENST00000367178 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 75.3 ms