RNA–Protein interactions for RNA: ENST00000367123.7

SRGAP2C-202, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRGAP2C, Length 7,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-202ENST00000367123 FLGP20930 4061 aaPredicted RBP3.64□□□□□ -1.83
SRGAP2C-202ENST00000367123 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
SRGAP2C-202ENST00000367123 KRTAP9-2Q9BYQ4 174 aa3.58□□□□□ -1.84
SRGAP2C-202ENST00000367123 MUC17Q685J3 4493 aa3.58□□□□□ -1.84
SRGAP2C-202ENST00000367123 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
SRGAP2C-202ENST00000367123 KRTAP4-7Q9BYR0 210 aa3.53□□□□□ -1.84
SRGAP2C-202ENST00000367123 MUC2Q02817 5179 aa3.51□□□□□ -1.85
SRGAP2C-202ENST00000367123 UBR4Q5T4S7 5183 aa3.49□□□□□ -1.85
SRGAP2C-202ENST00000367123 FAT4Q6V0I7 4981 aa3.49□□□□□ -1.85
SRGAP2C-202ENST00000367123 HMCN2Q8NDA2 5059 aa3.43□□□□□ -1.86
SRGAP2C-202ENST00000367123 RNF213Q63HN8 5207 aa3.42□□□□□ -1.86
SRGAP2C-202ENST00000367123 MT1LQ93083 61 aa3.39□□□□□ -1.87
SRGAP2C-202ENST00000367123 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
SRGAP2C-202ENST00000367123 KRTAP19-6Q3LI70 58 aa3.38□□□□□ -1.87
SRGAP2C-202ENST00000367123 MT1EP04732 61 aa3.38□□□□□ -1.87
SRGAP2C-202ENST00000367123 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
SRGAP2C-202ENST00000367123 LCE2AQ5TA79 106 aaPredicted RBP3.34□□□□□ -1.88
SRGAP2C-202ENST00000367123 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
SRGAP2C-202ENST00000367123 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
SRGAP2C-202ENST00000367123 KRTAP4-9Q9BYQ8 210 aa3.31□□□□□ -1.88
SRGAP2C-202ENST00000367123 MT3P25713 68 aa3.3□□□□□ -1.88
SRGAP2C-202ENST00000367123 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
SRGAP2C-202ENST00000367123 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
SRGAP2C-202ENST00000367123 PRM1P04553 51 aa3.26□□□□□ -1.89
SRGAP2C-202ENST00000367123 MT1MQ8N339 61 aa3.26□□□□□ -1.89
SRGAP2C-202ENST00000367123 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
SRGAP2C-202ENST00000367123 KRTAP19-7Q3SYF9 63 aa3.2□□□□□ -1.9
SRGAP2C-202ENST00000367123 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
SRGAP2C-202ENST00000367123 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
SRGAP2C-202ENST00000367123 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
SRGAP2C-202ENST00000367123 KMT2DO14686 5537 aa3.06□□□□□ -1.92
SRGAP2C-202ENST00000367123 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
SRGAP2C-202ENST00000367123 FCGBPQ9Y6R7 5405 aaPredicted RBP3.04□□□□□ -1.92
SRGAP2C-202ENST00000367123 USH2AO75445 5202 aa3.03□□□□□ -1.92
SRGAP2C-202ENST00000367123 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
SRGAP2C-202ENST00000367123 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
SRGAP2C-202ENST00000367123 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
SRGAP2C-202ENST00000367123 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
SRGAP2C-202ENST00000367123 MT1AP04731 61 aa2.95□□□□□ -1.94
SRGAP2C-202ENST00000367123 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
SRGAP2C-202ENST00000367123 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.9□□□□□ -1.95
SRGAP2C-202ENST00000367123 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
SRGAP2C-202ENST00000367123 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.96
SRGAP2C-202ENST00000367123 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
SRGAP2C-202ENST00000367123 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
SRGAP2C-202ENST00000367123 MUC12Q9UKN1 5478 aa2.78□□□□□ -1.96
SRGAP2C-202ENST00000367123 KRTAP9-4Q9BYQ2 154 aa2.75□□□□□ -1.97
SRGAP2C-202ENST00000367123 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
SRGAP2C-202ENST00000367123 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
SRGAP2C-202ENST00000367123 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
SRGAP2C-202ENST00000367123 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
SRGAP2C-202ENST00000367123 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
SRGAP2C-202ENST00000367123 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
SRGAP2C-202ENST00000367123 NEBP20929 6669 aa2.51□□□□□ -2.01
SRGAP2C-202ENST00000367123 MDN1Q9NU22 5596 aa2.5□□□□□ -2.01
SRGAP2C-202ENST00000367123 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
SRGAP2C-202ENST00000367123 KRTAP4-11Q9BYQ6 195 aa2.45□□□□□ -2.02
SRGAP2C-202ENST00000367123 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
SRGAP2C-202ENST00000367123 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
SRGAP2C-202ENST00000367123 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
SRGAP2C-202ENST00000367123 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
SRGAP2C-202ENST00000367123 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
SRGAP2C-202ENST00000367123 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
SRGAP2C-202ENST00000367123 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
SRGAP2C-202ENST00000367123 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
SRGAP2C-202ENST00000367123 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
SRGAP2C-202ENST00000367123 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
SRGAP2C-202ENST00000367123 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
SRGAP2C-202ENST00000367123 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
SRGAP2C-202ENST00000367123 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
SRGAP2C-202ENST00000367123 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.16
SRGAP2C-202ENST00000367123 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
SRGAP2C-202ENST00000367123 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
SRGAP2C-202ENST00000367123 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
SRGAP2C-202ENST00000367123 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
SRGAP2C-202ENST00000367123 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
SRGAP2C-202ENST00000367123 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 86.7 ms