RNA–Protein interactions for RNA: ENST00000366960.7

RPS6KC1-202, Transcript of ribosomal protein S6 kinase C1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPS6KC1, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-202ENST00000366960 TNXBP22105 4242 aa4.48□□□□□ -1.69
RPS6KC1-202ENST00000366960 MUC2Q02817 5179 aa4.46□□□□□ -1.7
RPS6KC1-202ENST00000366960 MT1MQ8N339 61 aa4.45□□□□□ -1.7
RPS6KC1-202ENST00000366960 FAT4Q6V0I7 4981 aa4.44□□□□□ -1.7
RPS6KC1-202ENST00000366960 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
RPS6KC1-202ENST00000366960 RNF213Q63HN8 5207 aa4.41□□□□□ -1.7
RPS6KC1-202ENST00000366960 HMCN2Q8NDA2 5059 aa4.39□□□□□ -1.71
RPS6KC1-202ENST00000366960 PRM1P04553 51 aa4.36□□□□□ -1.71
RPS6KC1-202ENST00000366960 LCE2DQ5TA82 110 aaPredicted RBP4.36□□□□□ -1.71
RPS6KC1-202ENST00000366960 MT4P47944 62 aa4.31□□□□□ -1.72
RPS6KC1-202ENST00000366960 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
RPS6KC1-202ENST00000366960 MT3P25713 68 aa4.3□□□□□ -1.72
RPS6KC1-202ENST00000366960 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
RPS6KC1-202ENST00000366960 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
RPS6KC1-202ENST00000366960 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
RPS6KC1-202ENST00000366960 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
RPS6KC1-202ENST00000366960 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
RPS6KC1-202ENST00000366960 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
RPS6KC1-202ENST00000366960 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.74
RPS6KC1-202ENST00000366960 LCE2AQ5TA79 106 aaPredicted RBP4.15□□□□□ -1.75
RPS6KC1-202ENST00000366960 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
RPS6KC1-202ENST00000366960 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
RPS6KC1-202ENST00000366960 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
RPS6KC1-202ENST00000366960 MT1AP04731 61 aa4.09□□□□□ -1.75
RPS6KC1-202ENST00000366960 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.75
RPS6KC1-202ENST00000366960 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
RPS6KC1-202ENST00000366960 USH2AO75445 5202 aa4.03□□□□□ -1.76
RPS6KC1-202ENST00000366960 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
RPS6KC1-202ENST00000366960 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
RPS6KC1-202ENST00000366960 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
RPS6KC1-202ENST00000366960 LCE5AQ5TCM9 118 aa3.85□□□□□ -1.79
RPS6KC1-202ENST00000366960 KMT2DO14686 5537 aa3.84□□□□□ -1.79
RPS6KC1-202ENST00000366960 KRTAP9-6A0A140TA67 174 aa3.81□□□□□ -1.8
RPS6KC1-202ENST00000366960 KRTAP9-7A8MTY7 169 aa3.8□□□□□ -1.8
RPS6KC1-202ENST00000366960 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
RPS6KC1-202ENST00000366960 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
RPS6KC1-202ENST00000366960 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
RPS6KC1-202ENST00000366960 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
RPS6KC1-202ENST00000366960 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
RPS6KC1-202ENST00000366960 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
RPS6KC1-202ENST00000366960 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.58□□□□□ -1.84
RPS6KC1-202ENST00000366960 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
RPS6KC1-202ENST00000366960 SSPOA2VEC9 5147 aa3.51□□□□□ -1.85
RPS6KC1-202ENST00000366960 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
RPS6KC1-202ENST00000366960 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
RPS6KC1-202ENST00000366960 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
RPS6KC1-202ENST00000366960 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
RPS6KC1-202ENST00000366960 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
RPS6KC1-202ENST00000366960 NEBP20929 6669 aa3.31□□□□□ -1.88
RPS6KC1-202ENST00000366960 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
RPS6KC1-202ENST00000366960 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
RPS6KC1-202ENST00000366960 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
RPS6KC1-202ENST00000366960 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
RPS6KC1-202ENST00000366960 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
RPS6KC1-202ENST00000366960 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.92
RPS6KC1-202ENST00000366960 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
RPS6KC1-202ENST00000366960 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
RPS6KC1-202ENST00000366960 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
RPS6KC1-202ENST00000366960 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
RPS6KC1-202ENST00000366960 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
RPS6KC1-202ENST00000366960 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
RPS6KC1-202ENST00000366960 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
RPS6KC1-202ENST00000366960 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
RPS6KC1-202ENST00000366960 KRTAP5-3Q6L8H2 238 aa2.46□□□□□ -2.02
RPS6KC1-202ENST00000366960 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
RPS6KC1-202ENST00000366960 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
RPS6KC1-202ENST00000366960 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
RPS6KC1-202ENST00000366960 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
RPS6KC1-202ENST00000366960 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
RPS6KC1-202ENST00000366960 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
RPS6KC1-202ENST00000366960 PHGR1C9JFL3 82 aa2.03□□□□□ -2.09
RPS6KC1-202ENST00000366960 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
RPS6KC1-202ENST00000366960 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
RPS6KC1-202ENST00000366960 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
RPS6KC1-202ENST00000366960 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
RPS6KC1-202ENST00000366960 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
RPS6KC1-202ENST00000366960 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 18 ms