RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
SMURF1-202ENST00000361368 MT1AP04731 61 aa5.98□□□□□ -1.45
SMURF1-202ENST00000361368 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
SMURF1-202ENST00000361368 KRTAP20-1Q3LI63 56 aa5.9□□□□□ -1.46
SMURF1-202ENST00000361368 KMT2CQ8NEZ4 4911 aaKnown RBP5.89□□□□□ -1.47
SMURF1-202ENST00000361368 MUC17Q685J3 4493 aa5.85□□□□□ -1.47
SMURF1-202ENST00000361368 FLGP20930 4061 aaPredicted RBP5.84□□□□□ -1.47
SMURF1-202ENST00000361368 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
SMURF1-202ENST00000361368 KRTAP19-7Q3SYF9 63 aa5.8□□□□□ -1.48
SMURF1-202ENST00000361368 LCE2AQ5TA79 106 aaPredicted RBP5.8□□□□□ -1.48
SMURF1-202ENST00000361368 TNXBP22105 4242 aa5.77□□□□□ -1.49
SMURF1-202ENST00000361368 LPAP08519 4548 aa5.76□□□□□ -1.49
SMURF1-202ENST00000361368 KRTAP2-3P0C7H8 128 aa5.75□□□□□ -1.49
SMURF1-202ENST00000361368 KRTAP2-4Q9BYR9 128 aa5.75□□□□□ -1.49
SMURF1-202ENST00000361368 KRTAP2-1Q9BYU5 128 aa5.75□□□□□ -1.49
SMURF1-202ENST00000361368 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
SMURF1-202ENST00000361368 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
SMURF1-202ENST00000361368 ABCA13Q86UQ4 5058 aa5.72□□□□□ -1.49
SMURF1-202ENST00000361368 KRTAP6-3Q3LI67 103 aa5.68□□□□□ -1.5
SMURF1-202ENST00000361368 KRTAP9-7A8MTY7 169 aa5.67□□□□□ -1.5
SMURF1-202ENST00000361368 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
SMURF1-202ENST00000361368 RNF213Q63HN8 5207 aa5.57□□□□□ -1.52
SMURF1-202ENST00000361368 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
SMURF1-202ENST00000361368 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
SMURF1-202ENST00000361368 KRTAP9-4Q9BYQ2 154 aa5.49□□□□□ -1.53
SMURF1-202ENST00000361368 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.53
SMURF1-202ENST00000361368 KRTAP2-2Q9BYT5 123 aa5.45□□□□□ -1.54
SMURF1-202ENST00000361368 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
SMURF1-202ENST00000361368 FAT4Q6V0I7 4981 aa5.42□□□□□ -1.54
SMURF1-202ENST00000361368 UBR4Q5T4S7 5183 aa5.4□□□□□ -1.54
SMURF1-202ENST00000361368 LCE1CQ5T751 118 aa5.38□□□□□ -1.55
SMURF1-202ENST00000361368 LCE1EQ5T753 118 aa5.38□□□□□ -1.55
SMURF1-202ENST00000361368 LCE1FQ5T754 118 aa5.38□□□□□ -1.55
SMURF1-202ENST00000361368 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.37□□□□□ -1.55
SMURF1-202ENST00000361368 MUC2Q02817 5179 aa5.29□□□□□ -1.56
SMURF1-202ENST00000361368 HMCN2Q8NDA2 5059 aa5.28□□□□□ -1.56
SMURF1-202ENST00000361368 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
SMURF1-202ENST00000361368 FSIP2Q5CZC0 6907 aa5.26□□□□□ -1.57
SMURF1-202ENST00000361368 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
SMURF1-202ENST00000361368 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
SMURF1-202ENST00000361368 USH2AO75445 5202 aa4.65□□□□□ -1.67
SMURF1-202ENST00000361368 NEBP20929 6669 aa4.62□□□□□ -1.67
SMURF1-202ENST00000361368 KRTAP5-9P26371 169 aa4.59□□□□□ -1.68
SMURF1-202ENST00000361368 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
SMURF1-202ENST00000361368 MACF1Q9UPN3 7388 aaKnown RBP4.45□□□□□ -1.7
SMURF1-202ENST00000361368 DSTQ03001 7570 aaKnown RBP4.44□□□□□ -1.7
SMURF1-202ENST00000361368 FCGBPQ9Y6R7 5405 aaPredicted RBP4.44□□□□□ -1.7
SMURF1-202ENST00000361368 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
SMURF1-202ENST00000361368 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
SMURF1-202ENST00000361368 KMT2DO14686 5537 aa4.39□□□□□ -1.71
SMURF1-202ENST00000361368 GPR98Q8WXG9 6306 aa4.33□□□□□ -1.72
SMURF1-202ENST00000361368 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
SMURF1-202ENST00000361368 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
SMURF1-202ENST00000361368 MUC19Q7Z5P9 8384 aa4.24□□□□□ -1.73
SMURF1-202ENST00000361368 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
SMURF1-202ENST00000361368 MDN1Q9NU22 5596 aa4.13□□□□□ -1.75
SMURF1-202ENST00000361368 KRTAP4-4Q9BYR3 166 aa4.12□□□□□ -1.75
SMURF1-202ENST00000361368 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
SMURF1-202ENST00000361368 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
SMURF1-202ENST00000361368 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
SMURF1-202ENST00000361368 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
SMURF1-202ENST00000361368 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
SMURF1-202ENST00000361368 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
SMURF1-202ENST00000361368 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
SMURF1-202ENST00000361368 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
SMURF1-202ENST00000361368 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
SMURF1-202ENST00000361368 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
SMURF1-202ENST00000361368 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
SMURF1-202ENST00000361368 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
SMURF1-202ENST00000361368 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
SMURF1-202ENST00000361368 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
SMURF1-202ENST00000361368 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
SMURF1-202ENST00000361368 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
SMURF1-202ENST00000361368 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
SMURF1-202ENST00000361368 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
SMURF1-202ENST00000361368 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
SMURF1-202ENST00000361368 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 63.1 ms