RNA–Protein interactions for RNA: ENST00000361204.8

SREBF2-201, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SREBF2, Length 5,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-201ENST00000361204 MUC2Q02817 5179 aa5.57□□□□□ -1.52
SREBF2-201ENST00000361204 KRTAP9-6A0A140TA67 174 aa5.57□□□□□ -1.52
SREBF2-201ENST00000361204 HMCN2Q8NDA2 5059 aa5.55□□□□□ -1.52
SREBF2-201ENST00000361204 SPRR2DP22532 72 aa5.54□□□□□ -1.52
SREBF2-201ENST00000361204 MT1MQ8N339 61 aa5.52□□□□□ -1.53
SREBF2-201ENST00000361204 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
SREBF2-201ENST00000361204 PRM1P04553 51 aa5.48□□□□□ -1.53
SREBF2-201ENST00000361204 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
SREBF2-201ENST00000361204 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
SREBF2-201ENST00000361204 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
SREBF2-201ENST00000361204 KRTAP19-7Q3SYF9 63 aa5.44□□□□□ -1.54
SREBF2-201ENST00000361204 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
SREBF2-201ENST00000361204 LCE2AQ5TA79 106 aaPredicted RBP5.35□□□□□ -1.55
SREBF2-201ENST00000361204 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
SREBF2-201ENST00000361204 MT3P25713 68 aa5.31□□□□□ -1.56
SREBF2-201ENST00000361204 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
SREBF2-201ENST00000361204 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
SREBF2-201ENST00000361204 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
SREBF2-201ENST00000361204 MT1AP04731 61 aa5.16□□□□□ -1.58
SREBF2-201ENST00000361204 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
SREBF2-201ENST00000361204 LCE2DQ5TA82 110 aaPredicted RBP5.08□□□□□ -1.6
SREBF2-201ENST00000361204 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
SREBF2-201ENST00000361204 KRTAP9-7A8MTY7 169 aa4.99□□□□□ -1.61
SREBF2-201ENST00000361204 FCGBPQ9Y6R7 5405 aaPredicted RBP4.97□□□□□ -1.61
SREBF2-201ENST00000361204 MT4P47944 62 aa4.97□□□□□ -1.61
SREBF2-201ENST00000361204 DSTQ03001 7570 aaKnown RBP4.91□□□□□ -1.62
SREBF2-201ENST00000361204 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.62
SREBF2-201ENST00000361204 LCE1DQ5T752 114 aa4.9□□□□□ -1.62
SREBF2-201ENST00000361204 USH2AO75445 5202 aa4.9□□□□□ -1.62
SREBF2-201ENST00000361204 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.63
SREBF2-201ENST00000361204 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
SREBF2-201ENST00000361204 KMT2DO14686 5537 aa4.83□□□□□ -1.64
SREBF2-201ENST00000361204 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
SREBF2-201ENST00000361204 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
SREBF2-201ENST00000361204 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
SREBF2-201ENST00000361204 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
SREBF2-201ENST00000361204 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.55□□□□□ -1.68
SREBF2-201ENST00000361204 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
SREBF2-201ENST00000361204 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
SREBF2-201ENST00000361204 MACF1Q9UPN3 7388 aaKnown RBP4.5□□□□□ -1.69
SREBF2-201ENST00000361204 SSPOA2VEC9 5147 aa4.45□□□□□ -1.7
SREBF2-201ENST00000361204 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
SREBF2-201ENST00000361204 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
SREBF2-201ENST00000361204 MDN1Q9NU22 5596 aa4.2□□□□□ -1.74
SREBF2-201ENST00000361204 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
SREBF2-201ENST00000361204 MUC19Q7Z5P9 8384 aa4.1□□□□□ -1.75
SREBF2-201ENST00000361204 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
SREBF2-201ENST00000361204 NEBP20929 6669 aa4.08□□□□□ -1.76
SREBF2-201ENST00000361204 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
SREBF2-201ENST00000361204 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
SREBF2-201ENST00000361204 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
SREBF2-201ENST00000361204 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
SREBF2-201ENST00000361204 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
SREBF2-201ENST00000361204 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
SREBF2-201ENST00000361204 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
SREBF2-201ENST00000361204 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
SREBF2-201ENST00000361204 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
SREBF2-201ENST00000361204 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
SREBF2-201ENST00000361204 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
SREBF2-201ENST00000361204 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
SREBF2-201ENST00000361204 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
SREBF2-201ENST00000361204 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
SREBF2-201ENST00000361204 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
SREBF2-201ENST00000361204 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
SREBF2-201ENST00000361204 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.92
SREBF2-201ENST00000361204 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
SREBF2-201ENST00000361204 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
SREBF2-201ENST00000361204 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.94
SREBF2-201ENST00000361204 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
SREBF2-201ENST00000361204 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
SREBF2-201ENST00000361204 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
SREBF2-201ENST00000361204 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
SREBF2-201ENST00000361204 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
SREBF2-201ENST00000361204 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
SREBF2-201ENST00000361204 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
SREBF2-201ENST00000361204 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
SREBF2-201ENST00000361204 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 13.6 ms