RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.77
CCDC144A-203ENST00000360495 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
CCDC144A-203ENST00000360495 TNXBP22105 4242 aa3.95□□□□□ -1.78
CCDC144A-203ENST00000360495 LPAP08519 4548 aa3.94□□□□□ -1.78
CCDC144A-203ENST00000360495 KRTAP2-3P0C7H8 128 aa3.93□□□□□ -1.78
CCDC144A-203ENST00000360495 KRTAP2-4Q9BYR9 128 aa3.93□□□□□ -1.78
CCDC144A-203ENST00000360495 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
CCDC144A-203ENST00000360495 MUC17Q685J3 4493 aa3.93□□□□□ -1.78
CCDC144A-203ENST00000360495 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
CCDC144A-203ENST00000360495 LCE2AQ5TA79 106 aaPredicted RBP3.91□□□□□ -1.78
CCDC144A-203ENST00000360495 FLGP20930 4061 aaPredicted RBP3.9□□□□□ -1.78
CCDC144A-203ENST00000360495 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
CCDC144A-203ENST00000360495 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
CCDC144A-203ENST00000360495 MT4P47944 62 aa3.85□□□□□ -1.79
CCDC144A-203ENST00000360495 MT1AP04731 61 aa3.81□□□□□ -1.8
CCDC144A-203ENST00000360495 KRTAP9-6A0A140TA67 174 aa3.81□□□□□ -1.8
CCDC144A-203ENST00000360495 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
CCDC144A-203ENST00000360495 RNF213Q63HN8 5207 aa3.8□□□□□ -1.8
CCDC144A-203ENST00000360495 FAT4Q6V0I7 4981 aa3.78□□□□□ -1.8
CCDC144A-203ENST00000360495 UBR4Q5T4S7 5183 aa3.77□□□□□ -1.81
CCDC144A-203ENST00000360495 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
CCDC144A-203ENST00000360495 HMCN2Q8NDA2 5059 aa3.66□□□□□ -1.82
CCDC144A-203ENST00000360495 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
CCDC144A-203ENST00000360495 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
CCDC144A-203ENST00000360495 KRTAP9-7A8MTY7 169 aa3.6□□□□□ -1.83
CCDC144A-203ENST00000360495 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
CCDC144A-203ENST00000360495 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
CCDC144A-203ENST00000360495 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
CCDC144A-203ENST00000360495 FSIP2Q5CZC0 6907 aa3.55□□□□□ -1.84
CCDC144A-203ENST00000360495 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
CCDC144A-203ENST00000360495 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
CCDC144A-203ENST00000360495 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
CCDC144A-203ENST00000360495 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
CCDC144A-203ENST00000360495 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.86
CCDC144A-203ENST00000360495 MUC2Q02817 5179 aa3.44□□□□□ -1.86
CCDC144A-203ENST00000360495 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
CCDC144A-203ENST00000360495 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
CCDC144A-203ENST00000360495 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
CCDC144A-203ENST00000360495 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
CCDC144A-203ENST00000360495 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
CCDC144A-203ENST00000360495 FCGBPQ9Y6R7 5405 aaPredicted RBP3.19□□□□□ -1.9
CCDC144A-203ENST00000360495 USH2AO75445 5202 aa3.18□□□□□ -1.9
CCDC144A-203ENST00000360495 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
CCDC144A-203ENST00000360495 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
CCDC144A-203ENST00000360495 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
CCDC144A-203ENST00000360495 NEBP20929 6669 aa3.02□□□□□ -1.93
CCDC144A-203ENST00000360495 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
CCDC144A-203ENST00000360495 SSPOA2VEC9 5147 aa2.99□□□□□ -1.93
CCDC144A-203ENST00000360495 MACF1Q9UPN3 7388 aaKnown RBP2.95□□□□□ -1.94
CCDC144A-203ENST00000360495 KMT2DO14686 5537 aa2.86□□□□□ -1.95
CCDC144A-203ENST00000360495 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
CCDC144A-203ENST00000360495 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
CCDC144A-203ENST00000360495 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
CCDC144A-203ENST00000360495 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
CCDC144A-203ENST00000360495 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
CCDC144A-203ENST00000360495 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
CCDC144A-203ENST00000360495 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
CCDC144A-203ENST00000360495 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
CCDC144A-203ENST00000360495 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
CCDC144A-203ENST00000360495 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
CCDC144A-203ENST00000360495 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
CCDC144A-203ENST00000360495 KRTAP5-3Q6L8H2 238 aa2.34□□□□□ -2.04
CCDC144A-203ENST00000360495 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
CCDC144A-203ENST00000360495 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
CCDC144A-203ENST00000360495 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
CCDC144A-203ENST00000360495 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
CCDC144A-203ENST00000360495 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
CCDC144A-203ENST00000360495 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
CCDC144A-203ENST00000360495 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
CCDC144A-203ENST00000360495 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
CCDC144A-203ENST00000360495 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
CCDC144A-203ENST00000360495 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
CCDC144A-203ENST00000360495 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
CCDC144A-203ENST00000360495 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
CCDC144A-203ENST00000360495 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
CCDC144A-203ENST00000360495 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
CCDC144A-203ENST00000360495 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
CCDC144A-203ENST00000360495 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 66.1 ms