RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 FLGP20930 4061 aaPredicted RBP5.3□□□□□ -1.56
COL4A2-201ENST00000360467 KMT2CQ8NEZ4 4911 aaKnown RBP5.29□□□□□ -1.56
COL4A2-201ENST00000360467 MT3P25713 68 aa5.25□□□□□ -1.57
COL4A2-201ENST00000360467 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
COL4A2-201ENST00000360467 PRM1P04553 51 aa5.23□□□□□ -1.57
COL4A2-201ENST00000360467 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
COL4A2-201ENST00000360467 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
COL4A2-201ENST00000360467 KRTAP20-1Q3LI63 56 aa5.07□□□□□ -1.6
COL4A2-201ENST00000360467 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
COL4A2-201ENST00000360467 SYNE2Q8WXH0 6885 aaKnown RBP5.02□□□□□ -1.61
COL4A2-201ENST00000360467 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
COL4A2-201ENST00000360467 FSIP2Q5CZC0 6907 aa4.94□□□□□ -1.62
COL4A2-201ENST00000360467 LCE2AQ5TA79 106 aaPredicted RBP4.93□□□□□ -1.62
COL4A2-201ENST00000360467 EPPK1P58107 5090 aaKnown RBP4.91□□□□□ -1.62
COL4A2-201ENST00000360467 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
COL4A2-201ENST00000360467 MT1AP04731 61 aa4.86□□□□□ -1.63
COL4A2-201ENST00000360467 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
COL4A2-201ENST00000360467 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
COL4A2-201ENST00000360467 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
COL4A2-201ENST00000360467 HMCN2Q8NDA2 5059 aa4.82□□□□□ -1.64
COL4A2-201ENST00000360467 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
COL4A2-201ENST00000360467 ABCA13Q86UQ4 5058 aa4.81□□□□□ -1.64
COL4A2-201ENST00000360467 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
COL4A2-201ENST00000360467 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
COL4A2-201ENST00000360467 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.7□□□□□ -1.66
COL4A2-201ENST00000360467 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
COL4A2-201ENST00000360467 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
COL4A2-201ENST00000360467 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
COL4A2-201ENST00000360467 LCE1FQ5T754 118 aa4.68□□□□□ -1.66
COL4A2-201ENST00000360467 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
COL4A2-201ENST00000360467 RNF213Q63HN8 5207 aa4.64□□□□□ -1.67
COL4A2-201ENST00000360467 MUC2Q02817 5179 aa4.6□□□□□ -1.67
COL4A2-201ENST00000360467 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
COL4A2-201ENST00000360467 UBR4Q5T4S7 5183 aa4.53□□□□□ -1.68
COL4A2-201ENST00000360467 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
COL4A2-201ENST00000360467 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
COL4A2-201ENST00000360467 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
COL4A2-201ENST00000360467 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
COL4A2-201ENST00000360467 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
COL4A2-201ENST00000360467 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
COL4A2-201ENST00000360467 KMT2DO14686 5537 aa4.08□□□□□ -1.76
COL4A2-201ENST00000360467 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
COL4A2-201ENST00000360467 MACF1Q9UPN3 7388 aaKnown RBP3.94□□□□□ -1.78
COL4A2-201ENST00000360467 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
COL4A2-201ENST00000360467 USH2AO75445 5202 aa3.89□□□□□ -1.79
COL4A2-201ENST00000360467 FCGBPQ9Y6R7 5405 aaPredicted RBP3.89□□□□□ -1.79
COL4A2-201ENST00000360467 NEBP20929 6669 aa3.87□□□□□ -1.79
COL4A2-201ENST00000360467 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
COL4A2-201ENST00000360467 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
COL4A2-201ENST00000360467 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
COL4A2-201ENST00000360467 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
COL4A2-201ENST00000360467 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
COL4A2-201ENST00000360467 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
COL4A2-201ENST00000360467 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
COL4A2-201ENST00000360467 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
COL4A2-201ENST00000360467 MUC12Q9UKN1 5478 aa3.46□□□□□ -1.86
COL4A2-201ENST00000360467 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
COL4A2-201ENST00000360467 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
COL4A2-201ENST00000360467 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
COL4A2-201ENST00000360467 KRTAP5-3Q6L8H2 238 aa3.07□□□□□ -1.92
COL4A2-201ENST00000360467 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
COL4A2-201ENST00000360467 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
COL4A2-201ENST00000360467 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
COL4A2-201ENST00000360467 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
COL4A2-201ENST00000360467 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
COL4A2-201ENST00000360467 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
COL4A2-201ENST00000360467 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
COL4A2-201ENST00000360467 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
COL4A2-201ENST00000360467 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
COL4A2-201ENST00000360467 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
COL4A2-201ENST00000360467 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
COL4A2-201ENST00000360467 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
COL4A2-201ENST00000360467 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
COL4A2-201ENST00000360467 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
COL4A2-201ENST00000360467 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
COL4A2-201ENST00000360467 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
COL4A2-201ENST00000360467 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 606.8 ms