RNA–Protein interactions for RNA: ENST00000359865.7

MTCL1-202, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene MTCL1, Length 6,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-202ENST00000359865 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
MTCL1-202ENST00000359865 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
MTCL1-202ENST00000359865 MT4P47944 62 aa4.43□□□□□ -1.7
MTCL1-202ENST00000359865 FAT4Q6V0I7 4981 aa4.37□□□□□ -1.71
MTCL1-202ENST00000359865 MT3P25713 68 aa4.36□□□□□ -1.71
MTCL1-202ENST00000359865 RNF213Q63HN8 5207 aa4.31□□□□□ -1.72
MTCL1-202ENST00000359865 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
MTCL1-202ENST00000359865 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
MTCL1-202ENST00000359865 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
MTCL1-202ENST00000359865 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
MTCL1-202ENST00000359865 KRTAP9-7A8MTY7 169 aa4.26□□□□□ -1.73
MTCL1-202ENST00000359865 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
MTCL1-202ENST00000359865 HMCN2Q8NDA2 5059 aa4.2□□□□□ -1.74
MTCL1-202ENST00000359865 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
MTCL1-202ENST00000359865 MT1AP04731 61 aa4.18□□□□□ -1.74
MTCL1-202ENST00000359865 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
MTCL1-202ENST00000359865 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.15□□□□□ -1.75
MTCL1-202ENST00000359865 UBR4Q5T4S7 5183 aa4.12□□□□□ -1.75
MTCL1-202ENST00000359865 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
MTCL1-202ENST00000359865 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
MTCL1-202ENST00000359865 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
MTCL1-202ENST00000359865 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
MTCL1-202ENST00000359865 PRM1P04553 51 aa4.08□□□□□ -1.76
MTCL1-202ENST00000359865 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
MTCL1-202ENST00000359865 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
MTCL1-202ENST00000359865 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
MTCL1-202ENST00000359865 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
MTCL1-202ENST00000359865 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
MTCL1-202ENST00000359865 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
MTCL1-202ENST00000359865 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
MTCL1-202ENST00000359865 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
MTCL1-202ENST00000359865 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
MTCL1-202ENST00000359865 MUC2Q02817 5179 aa3.86□□□□□ -1.79
MTCL1-202ENST00000359865 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
MTCL1-202ENST00000359865 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
MTCL1-202ENST00000359865 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
MTCL1-202ENST00000359865 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
MTCL1-202ENST00000359865 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
MTCL1-202ENST00000359865 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
MTCL1-202ENST00000359865 USH2AO75445 5202 aa3.57□□□□□ -1.84
MTCL1-202ENST00000359865 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
MTCL1-202ENST00000359865 SSPOA2VEC9 5147 aa3.45□□□□□ -1.86
MTCL1-202ENST00000359865 NEBP20929 6669 aa3.44□□□□□ -1.86
MTCL1-202ENST00000359865 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
MTCL1-202ENST00000359865 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
MTCL1-202ENST00000359865 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.87
MTCL1-202ENST00000359865 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
MTCL1-202ENST00000359865 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
MTCL1-202ENST00000359865 FCGBPQ9Y6R7 5405 aaPredicted RBP3.29□□□□□ -1.88
MTCL1-202ENST00000359865 KMT2DO14686 5537 aa3.25□□□□□ -1.89
MTCL1-202ENST00000359865 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
MTCL1-202ENST00000359865 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
MTCL1-202ENST00000359865 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
MTCL1-202ENST00000359865 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
MTCL1-202ENST00000359865 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
MTCL1-202ENST00000359865 MDN1Q9NU22 5596 aa2.91□□□□□ -1.94
MTCL1-202ENST00000359865 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
MTCL1-202ENST00000359865 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
MTCL1-202ENST00000359865 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
MTCL1-202ENST00000359865 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.96
MTCL1-202ENST00000359865 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
MTCL1-202ENST00000359865 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
MTCL1-202ENST00000359865 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
MTCL1-202ENST00000359865 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
MTCL1-202ENST00000359865 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
MTCL1-202ENST00000359865 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
MTCL1-202ENST00000359865 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
MTCL1-202ENST00000359865 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
MTCL1-202ENST00000359865 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
MTCL1-202ENST00000359865 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
MTCL1-202ENST00000359865 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
MTCL1-202ENST00000359865 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
MTCL1-202ENST00000359865 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
MTCL1-202ENST00000359865 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
MTCL1-202ENST00000359865 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
MTCL1-202ENST00000359865 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
MTCL1-202ENST00000359865 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 10.3 ms