RNA–Protein interactions for RNA: ENST00000356861.9

TNPO2-201, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 4,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-201ENST00000356861 LCE3EQ5T5B0 92 aa5.77□□□□□ -1.49
TNPO2-201ENST00000356861 HMCN2Q8NDA2 5059 aa5.74□□□□□ -1.49
TNPO2-201ENST00000356861 MT1MQ8N339 61 aa5.74□□□□□ -1.49
TNPO2-201ENST00000356861 LCE2AQ5TA79 106 aaPredicted RBP5.7□□□□□ -1.5
TNPO2-201ENST00000356861 FSIP2Q5CZC0 6907 aa5.69□□□□□ -1.5
TNPO2-201ENST00000356861 KRTAP19-7Q3SYF9 63 aa5.64□□□□□ -1.51
TNPO2-201ENST00000356861 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
TNPO2-201ENST00000356861 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
TNPO2-201ENST00000356861 MT3P25713 68 aa5.46□□□□□ -1.53
TNPO2-201ENST00000356861 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.54
TNPO2-201ENST00000356861 MUC2Q02817 5179 aa5.46□□□□□ -1.54
TNPO2-201ENST00000356861 LCE2DQ5TA82 110 aaPredicted RBP5.45□□□□□ -1.54
TNPO2-201ENST00000356861 KRTAP2-3P0C7H8 128 aa5.36□□□□□ -1.55
TNPO2-201ENST00000356861 KRTAP2-4Q9BYR9 128 aa5.36□□□□□ -1.55
TNPO2-201ENST00000356861 KRTAP2-1Q9BYU5 128 aa5.36□□□□□ -1.55
TNPO2-201ENST00000356861 MT1AP04731 61 aa5.32□□□□□ -1.56
TNPO2-201ENST00000356861 PRM1P04553 51 aa5.28□□□□□ -1.56
TNPO2-201ENST00000356861 MT4P47944 62 aa5.28□□□□□ -1.56
TNPO2-201ENST00000356861 KRTAP9-6A8MVA2 160 aa5.23□□□□□ -1.57
TNPO2-201ENST00000356861 OBSCNQ5VST9 7968 aa5.19□□□□□ -1.58
TNPO2-201ENST00000356861 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
TNPO2-201ENST00000356861 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.59
TNPO2-201ENST00000356861 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
TNPO2-201ENST00000356861 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
TNPO2-201ENST00000356861 LCE1DQ5T752 114 aa5.06□□□□□ -1.6
TNPO2-201ENST00000356861 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
TNPO2-201ENST00000356861 LCE1BQ5T7P3 118 aa5.04□□□□□ -1.6
TNPO2-201ENST00000356861 KRTAP6-1Q3LI64 71 aa5.02□□□□□ -1.61
TNPO2-201ENST00000356861 FCGBPQ9Y6R7 5405 aaPredicted RBP4.99□□□□□ -1.61
TNPO2-201ENST00000356861 USH2AO75445 5202 aa4.96□□□□□ -1.62
TNPO2-201ENST00000356861 KRTAP6-3Q3LI67 103 aa4.93□□□□□ -1.62
TNPO2-201ENST00000356861 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
TNPO2-201ENST00000356861 KRTAP9-4Q9BYQ2 154 aa4.88□□□□□ -1.63
TNPO2-201ENST00000356861 DSTQ03001 7570 aaKnown RBP4.84□□□□□ -1.63
TNPO2-201ENST00000356861 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
TNPO2-201ENST00000356861 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
TNPO2-201ENST00000356861 KMT2DO14686 5537 aa4.75□□□□□ -1.65
TNPO2-201ENST00000356861 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
TNPO2-201ENST00000356861 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
TNPO2-201ENST00000356861 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
TNPO2-201ENST00000356861 MACF1Q9UPN3 7388 aaKnown RBP4.51□□□□□ -1.69
TNPO2-201ENST00000356861 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
TNPO2-201ENST00000356861 SSPOA2VEC9 5147 aa4.48□□□□□ -1.69
TNPO2-201ENST00000356861 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
TNPO2-201ENST00000356861 MDN1Q9NU22 5596 aa4.25□□□□□ -1.73
TNPO2-201ENST00000356861 NEBP20929 6669 aa4.21□□□□□ -1.74
TNPO2-201ENST00000356861 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
TNPO2-201ENST00000356861 LCE1CQ5T751 118 aa4.13□□□□□ -1.75
TNPO2-201ENST00000356861 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
TNPO2-201ENST00000356861 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
TNPO2-201ENST00000356861 MUC19Q7Z5P9 8384 aa4.13□□□□□ -1.75
TNPO2-201ENST00000356861 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.76
TNPO2-201ENST00000356861 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
TNPO2-201ENST00000356861 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
TNPO2-201ENST00000356861 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
TNPO2-201ENST00000356861 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
TNPO2-201ENST00000356861 KRTAP5-4Q6L8H1 288 aa3.77□□□□□ -1.81
TNPO2-201ENST00000356861 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
TNPO2-201ENST00000356861 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
TNPO2-201ENST00000356861 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
TNPO2-201ENST00000356861 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
TNPO2-201ENST00000356861 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
TNPO2-201ENST00000356861 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
TNPO2-201ENST00000356861 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
TNPO2-201ENST00000356861 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
TNPO2-201ENST00000356861 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
TNPO2-201ENST00000356861 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
TNPO2-201ENST00000356861 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
TNPO2-201ENST00000356861 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
TNPO2-201ENST00000356861 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
TNPO2-201ENST00000356861 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
TNPO2-201ENST00000356861 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
TNPO2-201ENST00000356861 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
TNPO2-201ENST00000356861 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
TNPO2-201ENST00000356861 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
TNPO2-201ENST00000356861 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
TNPO2-201ENST00000356861 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms