RNA–Protein interactions for RNA: ENST00000348911.10

SBF1-201, Transcript of SET binding factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SBF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-201ENST00000348911 KRTAP9-2Q9BYQ4 174 aa4.65□□□□□ -1.66
SBF1-201ENST00000348911 KRTAP19-6Q3LI70 58 aa4.64□□□□□ -1.67
SBF1-201ENST00000348911 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
SBF1-201ENST00000348911 HMCN2Q8NDA2 5059 aa4.6□□□□□ -1.67
SBF1-201ENST00000348911 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
SBF1-201ENST00000348911 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
SBF1-201ENST00000348911 KRTAP2-1Q9BYU5 128 aa4.6□□□□□ -1.67
SBF1-201ENST00000348911 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
SBF1-201ENST00000348911 MT3P25713 68 aa4.57□□□□□ -1.68
SBF1-201ENST00000348911 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
SBF1-201ENST00000348911 FAT4Q6V0I7 4981 aa4.55□□□□□ -1.68
SBF1-201ENST00000348911 KRTAP9-6A0A140TA67 174 aa4.52□□□□□ -1.69
SBF1-201ENST00000348911 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
SBF1-201ENST00000348911 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
SBF1-201ENST00000348911 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
SBF1-201ENST00000348911 MT4P47944 62 aa4.45□□□□□ -1.7
SBF1-201ENST00000348911 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
SBF1-201ENST00000348911 MT1AP04731 61 aa4.43□□□□□ -1.7
SBF1-201ENST00000348911 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
SBF1-201ENST00000348911 LCE2AQ5TA79 106 aaPredicted RBP4.43□□□□□ -1.7
SBF1-201ENST00000348911 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
SBF1-201ENST00000348911 MUC2Q02817 5179 aa4.37□□□□□ -1.71
SBF1-201ENST00000348911 SYNE1Q8NF91 8797 aaKnown RBP4.32□□□□□ -1.72
SBF1-201ENST00000348911 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
SBF1-201ENST00000348911 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
SBF1-201ENST00000348911 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.73
SBF1-201ENST00000348911 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
SBF1-201ENST00000348911 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
SBF1-201ENST00000348911 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.75
SBF1-201ENST00000348911 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
SBF1-201ENST00000348911 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
SBF1-201ENST00000348911 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
SBF1-201ENST00000348911 KRTAP9-1A8MXZ3 250 aaPredicted RBP4□□□□□ -1.77
SBF1-201ENST00000348911 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
SBF1-201ENST00000348911 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
SBF1-201ENST00000348911 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
SBF1-201ENST00000348911 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
SBF1-201ENST00000348911 FCGBPQ9Y6R7 5405 aaPredicted RBP3.86□□□□□ -1.79
SBF1-201ENST00000348911 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
SBF1-201ENST00000348911 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
SBF1-201ENST00000348911 USH2AO75445 5202 aa3.83□□□□□ -1.8
SBF1-201ENST00000348911 KMT2DO14686 5537 aa3.83□□□□□ -1.8
SBF1-201ENST00000348911 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
SBF1-201ENST00000348911 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
SBF1-201ENST00000348911 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
SBF1-201ENST00000348911 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
SBF1-201ENST00000348911 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
SBF1-201ENST00000348911 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
SBF1-201ENST00000348911 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
SBF1-201ENST00000348911 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
SBF1-201ENST00000348911 NEBP20929 6669 aa3.35□□□□□ -1.87
SBF1-201ENST00000348911 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
SBF1-201ENST00000348911 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
SBF1-201ENST00000348911 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
SBF1-201ENST00000348911 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
SBF1-201ENST00000348911 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
SBF1-201ENST00000348911 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
SBF1-201ENST00000348911 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
SBF1-201ENST00000348911 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
SBF1-201ENST00000348911 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
SBF1-201ENST00000348911 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
SBF1-201ENST00000348911 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
SBF1-201ENST00000348911 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
SBF1-201ENST00000348911 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
SBF1-201ENST00000348911 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
SBF1-201ENST00000348911 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
SBF1-201ENST00000348911 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
SBF1-201ENST00000348911 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
SBF1-201ENST00000348911 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
SBF1-201ENST00000348911 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
SBF1-201ENST00000348911 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
SBF1-201ENST00000348911 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
SBF1-201ENST00000348911 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
SBF1-201ENST00000348911 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
SBF1-201ENST00000348911 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
SBF1-201ENST00000348911 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
SBF1-201ENST00000348911 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 84.4 ms