RNA–Protein interactions for RNA: ENST00000341462.8

FGFR1-203, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 6,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-203ENST00000341462 KRTAP19-6Q3LI70 58 aa5.85□□□□□ -1.47
FGFR1-203ENST00000341462 FLGP20930 4061 aaPredicted RBP5.84□□□□□ -1.48
FGFR1-203ENST00000341462 MT3P25713 68 aa5.83□□□□□ -1.48
FGFR1-203ENST00000341462 KRTAP9-6A0A140TA67 174 aa5.81□□□□□ -1.48
FGFR1-203ENST00000341462 LCE1BQ5T7P3 118 aa5.79□□□□□ -1.48
FGFR1-203ENST00000341462 LCE1DQ5T752 114 aa5.75□□□□□ -1.49
FGFR1-203ENST00000341462 FSIP2Q5CZC0 6907 aa5.71□□□□□ -1.5
FGFR1-203ENST00000341462 ABCA13Q86UQ4 5058 aa5.7□□□□□ -1.5
FGFR1-203ENST00000341462 PRM1P04553 51 aa5.69□□□□□ -1.5
FGFR1-203ENST00000341462 SYNE1Q8NF91 8797 aaKnown RBP5.65□□□□□ -1.51
FGFR1-203ENST00000341462 KRTAP20-1Q3LI63 56 aa5.58□□□□□ -1.52
FGFR1-203ENST00000341462 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
FGFR1-203ENST00000341462 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
FGFR1-203ENST00000341462 UBR4Q5T4S7 5183 aa5.53□□□□□ -1.52
FGFR1-203ENST00000341462 KRTAP9-7A8MTY7 169 aa5.5□□□□□ -1.53
FGFR1-203ENST00000341462 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
FGFR1-203ENST00000341462 FAT4Q6V0I7 4981 aa5.44□□□□□ -1.54
FGFR1-203ENST00000341462 RNF213Q63HN8 5207 aa5.44□□□□□ -1.54
FGFR1-203ENST00000341462 SYNE2Q8WXH0 6885 aaKnown RBP5.43□□□□□ -1.54
FGFR1-203ENST00000341462 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
FGFR1-203ENST00000341462 MT1AP04731 61 aa5.4□□□□□ -1.54
FGFR1-203ENST00000341462 MUC2Q02817 5179 aa5.38□□□□□ -1.55
FGFR1-203ENST00000341462 HMCN2Q8NDA2 5059 aa5.37□□□□□ -1.55
FGFR1-203ENST00000341462 KRTAP6-3Q3LI67 103 aa5.28□□□□□ -1.56
FGFR1-203ENST00000341462 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
FGFR1-203ENST00000341462 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
FGFR1-203ENST00000341462 KRTAP2-1Q9BYU5 128 aa5.28□□□□□ -1.56
FGFR1-203ENST00000341462 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.21□□□□□ -1.57
FGFR1-203ENST00000341462 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
FGFR1-203ENST00000341462 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
FGFR1-203ENST00000341462 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
FGFR1-203ENST00000341462 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
FGFR1-203ENST00000341462 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.6
FGFR1-203ENST00000341462 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
FGFR1-203ENST00000341462 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
FGFR1-203ENST00000341462 LCE1CQ5T751 118 aa5.03□□□□□ -1.6
FGFR1-203ENST00000341462 LCE1EQ5T753 118 aa5.03□□□□□ -1.6
FGFR1-203ENST00000341462 LCE1FQ5T754 118 aa5.03□□□□□ -1.6
FGFR1-203ENST00000341462 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
FGFR1-203ENST00000341462 USH2AO75445 5202 aa4.7□□□□□ -1.66
FGFR1-203ENST00000341462 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
FGFR1-203ENST00000341462 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
FGFR1-203ENST00000341462 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
FGFR1-203ENST00000341462 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
FGFR1-203ENST00000341462 KMT2DO14686 5537 aa4.57□□□□□ -1.68
FGFR1-203ENST00000341462 NEBP20929 6669 aa4.48□□□□□ -1.69
FGFR1-203ENST00000341462 KRTAP4-6Q9BYQ5 205 aa4.35□□□□□ -1.71
FGFR1-203ENST00000341462 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
FGFR1-203ENST00000341462 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
FGFR1-203ENST00000341462 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
FGFR1-203ENST00000341462 SSPOA2VEC9 5147 aa4.2□□□□□ -1.74
FGFR1-203ENST00000341462 MDN1Q9NU22 5596 aa4.17□□□□□ -1.74
FGFR1-203ENST00000341462 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
FGFR1-203ENST00000341462 MUC19Q7Z5P9 8384 aa4.11□□□□□ -1.75
FGFR1-203ENST00000341462 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.76
FGFR1-203ENST00000341462 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
FGFR1-203ENST00000341462 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
FGFR1-203ENST00000341462 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
FGFR1-203ENST00000341462 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
FGFR1-203ENST00000341462 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.81
FGFR1-203ENST00000341462 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
FGFR1-203ENST00000341462 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
FGFR1-203ENST00000341462 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
FGFR1-203ENST00000341462 AHNAK2Q8IVF2 5795 aa3.28□□□□□ -1.88
FGFR1-203ENST00000341462 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
FGFR1-203ENST00000341462 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
FGFR1-203ENST00000341462 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
FGFR1-203ENST00000341462 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
FGFR1-203ENST00000341462 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
FGFR1-203ENST00000341462 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
FGFR1-203ENST00000341462 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
FGFR1-203ENST00000341462 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
FGFR1-203ENST00000341462 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
FGFR1-203ENST00000341462 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
FGFR1-203ENST00000341462 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
FGFR1-203ENST00000341462 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
FGFR1-203ENST00000341462 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 123.7 ms