RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 KRTAP19-6Q3LI70 58 aa5.36□□□□□ -1.55
SYDE2-202ENST00000341460 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
SYDE2-202ENST00000341460 MT4P47944 62 aa5.26□□□□□ -1.57
SYDE2-202ENST00000341460 UBR4Q5T4S7 5183 aa5.23□□□□□ -1.57
SYDE2-202ENST00000341460 KRTAP2-3P0C7H8 128 aa5.23□□□□□ -1.57
SYDE2-202ENST00000341460 KRTAP2-4Q9BYR9 128 aa5.23□□□□□ -1.57
SYDE2-202ENST00000341460 KRTAP2-1Q9BYU5 128 aa5.23□□□□□ -1.57
SYDE2-202ENST00000341460 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
SYDE2-202ENST00000341460 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
SYDE2-202ENST00000341460 LCE1BQ5T7P3 118 aa5.21□□□□□ -1.58
SYDE2-202ENST00000341460 HMCN2Q8NDA2 5059 aa5.19□□□□□ -1.58
SYDE2-202ENST00000341460 SYNE1Q8NF91 8797 aaKnown RBP5.19□□□□□ -1.58
SYDE2-202ENST00000341460 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
SYDE2-202ENST00000341460 FSIP2Q5CZC0 6907 aa5.18□□□□□ -1.58
SYDE2-202ENST00000341460 RNF213Q63HN8 5207 aa5.16□□□□□ -1.58
SYDE2-202ENST00000341460 LCE2AQ5TA79 106 aaPredicted RBP5.14□□□□□ -1.59
SYDE2-202ENST00000341460 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
SYDE2-202ENST00000341460 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
SYDE2-202ENST00000341460 MT1AP04731 61 aa5.02□□□□□ -1.61
SYDE2-202ENST00000341460 KRTAP9-6A0A140TA67 174 aa5.01□□□□□ -1.61
SYDE2-202ENST00000341460 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
SYDE2-202ENST00000341460 MUC2Q02817 5179 aa4.96□□□□□ -1.62
SYDE2-202ENST00000341460 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
SYDE2-202ENST00000341460 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
SYDE2-202ENST00000341460 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
SYDE2-202ENST00000341460 KRTAP20-1Q3LI63 56 aa4.79□□□□□ -1.64
SYDE2-202ENST00000341460 LCE1AQ5T7P2 110 aa4.78□□□□□ -1.64
SYDE2-202ENST00000341460 SYNE2Q8WXH0 6885 aaKnown RBP4.77□□□□□ -1.65
SYDE2-202ENST00000341460 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
SYDE2-202ENST00000341460 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
SYDE2-202ENST00000341460 KRTAP6-1Q3LI64 71 aa4.65□□□□□ -1.67
SYDE2-202ENST00000341460 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
SYDE2-202ENST00000341460 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
SYDE2-202ENST00000341460 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
SYDE2-202ENST00000341460 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
SYDE2-202ENST00000341460 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
SYDE2-202ENST00000341460 FCGBPQ9Y6R7 5405 aaPredicted RBP4.53□□□□□ -1.68
SYDE2-202ENST00000341460 USH2AO75445 5202 aa4.47□□□□□ -1.69
SYDE2-202ENST00000341460 LCE1CQ5T751 118 aa4.47□□□□□ -1.69
SYDE2-202ENST00000341460 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
SYDE2-202ENST00000341460 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
SYDE2-202ENST00000341460 KMT2DO14686 5537 aa4.44□□□□□ -1.7
SYDE2-202ENST00000341460 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
SYDE2-202ENST00000341460 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
SYDE2-202ENST00000341460 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
SYDE2-202ENST00000341460 SSPOA2VEC9 5147 aa4.06□□□□□ -1.76
SYDE2-202ENST00000341460 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
SYDE2-202ENST00000341460 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
SYDE2-202ENST00000341460 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
SYDE2-202ENST00000341460 MUC19Q7Z5P9 8384 aa3.96□□□□□ -1.78
SYDE2-202ENST00000341460 NEBP20929 6669 aa3.94□□□□□ -1.78
SYDE2-202ENST00000341460 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
SYDE2-202ENST00000341460 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
SYDE2-202ENST00000341460 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
SYDE2-202ENST00000341460 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
SYDE2-202ENST00000341460 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
SYDE2-202ENST00000341460 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
SYDE2-202ENST00000341460 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
SYDE2-202ENST00000341460 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
SYDE2-202ENST00000341460 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
SYDE2-202ENST00000341460 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
SYDE2-202ENST00000341460 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
SYDE2-202ENST00000341460 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
SYDE2-202ENST00000341460 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
SYDE2-202ENST00000341460 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
SYDE2-202ENST00000341460 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
SYDE2-202ENST00000341460 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
SYDE2-202ENST00000341460 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
SYDE2-202ENST00000341460 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
SYDE2-202ENST00000341460 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
SYDE2-202ENST00000341460 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
SYDE2-202ENST00000341460 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
SYDE2-202ENST00000341460 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
SYDE2-202ENST00000341460 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
SYDE2-202ENST00000341460 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
SYDE2-202ENST00000341460 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
SYDE2-202ENST00000341460 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 6.8 ms