RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 BIRC6Q9NR09 4857 aa3.48□□□□□ -1.85
TNC-201ENST00000341037 LCE1DQ5T752 114 aa3.47□□□□□ -1.85
TNC-201ENST00000341037 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
TNC-201ENST00000341037 KMT2CQ8NEZ4 4911 aaKnown RBP3.4□□□□□ -1.87
TNC-201ENST00000341037 PCLOQ9Y6V0 5065 aa3.39□□□□□ -1.87
TNC-201ENST00000341037 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
TNC-201ENST00000341037 KRTAP9-6A0A140TA67 174 aa3.33□□□□□ -1.88
TNC-201ENST00000341037 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
TNC-201ENST00000341037 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
TNC-201ENST00000341037 MT1AP04731 61 aa3.26□□□□□ -1.89
TNC-201ENST00000341037 KRTAP19-7Q3SYF9 63 aa3.25□□□□□ -1.89
TNC-201ENST00000341037 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
TNC-201ENST00000341037 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
TNC-201ENST00000341037 KRTAP2-1Q9BYU5 128 aa3.22□□□□□ -1.89
TNC-201ENST00000341037 LCE2AQ5TA79 106 aaPredicted RBP3.21□□□□□ -1.9
TNC-201ENST00000341037 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
TNC-201ENST00000341037 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
TNC-201ENST00000341037 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
TNC-201ENST00000341037 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
TNC-201ENST00000341037 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
TNC-201ENST00000341037 FAT4Q6V0I7 4981 aa3.07□□□□□ -1.92
TNC-201ENST00000341037 EPPK1P58107 5090 aaKnown RBP3.07□□□□□ -1.92
TNC-201ENST00000341037 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
TNC-201ENST00000341037 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
TNC-201ENST00000341037 ABCA13Q86UQ4 5058 aa3.05□□□□□ -1.92
TNC-201ENST00000341037 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
TNC-201ENST00000341037 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
TNC-201ENST00000341037 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
TNC-201ENST00000341037 LCE1AQ5T7P2 110 aa3.04□□□□□ -1.92
TNC-201ENST00000341037 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
TNC-201ENST00000341037 LCE4AQ5TA78 99 aa3□□□□□ -1.93
TNC-201ENST00000341037 RNF213Q63HN8 5207 aa2.98□□□□□ -1.93
TNC-201ENST00000341037 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
TNC-201ENST00000341037 FSIP2Q5CZC0 6907 aa2.95□□□□□ -1.94
TNC-201ENST00000341037 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
TNC-201ENST00000341037 MUC2Q02817 5179 aa2.85□□□□□ -1.95
TNC-201ENST00000341037 UBR4Q5T4S7 5183 aa2.84□□□□□ -1.95
TNC-201ENST00000341037 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
TNC-201ENST00000341037 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
TNC-201ENST00000341037 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
TNC-201ENST00000341037 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
TNC-201ENST00000341037 KRTAP4-6Q9BYQ5 205 aa2.59□□□□□ -1.99
TNC-201ENST00000341037 KMT2DO14686 5537 aa2.54□□□□□ -2
TNC-201ENST00000341037 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
TNC-201ENST00000341037 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
TNC-201ENST00000341037 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
TNC-201ENST00000341037 NEBP20929 6669 aa2.48□□□□□ -2.01
TNC-201ENST00000341037 USH2AO75445 5202 aa2.44□□□□□ -2.02
TNC-201ENST00000341037 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
TNC-201ENST00000341037 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
TNC-201ENST00000341037 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
TNC-201ENST00000341037 FCGBPQ9Y6R7 5405 aaPredicted RBP2.4□□□□□ -2.03
TNC-201ENST00000341037 SSPOA2VEC9 5147 aa2.39□□□□□ -2.03
TNC-201ENST00000341037 DSTQ03001 7570 aaKnown RBP2.37□□□□□ -2.03
TNC-201ENST00000341037 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
TNC-201ENST00000341037 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
TNC-201ENST00000341037 MUC12Q9UKN1 5478 aa2.14□□□□□ -2.07
TNC-201ENST00000341037 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
TNC-201ENST00000341037 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
TNC-201ENST00000341037 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
TNC-201ENST00000341037 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
TNC-201ENST00000341037 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
TNC-201ENST00000341037 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
TNC-201ENST00000341037 GPR98Q8WXG9 6306 aa1.78□□□□□ -2.12
TNC-201ENST00000341037 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
TNC-201ENST00000341037 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
TNC-201ENST00000341037 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.14
TNC-201ENST00000341037 KRTAP5-1Q6L8H4 278 aa1.61□□□□□ -2.15
TNC-201ENST00000341037 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
TNC-201ENST00000341037 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
TNC-201ENST00000341037 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
TNC-201ENST00000341037 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
TNC-201ENST00000341037 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
TNC-201ENST00000341037 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
TNC-201ENST00000341037 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.26□□□□□ -2.21
TNC-201ENST00000341037 KRTAP5-7Q6L8G8 165 aa1.2□□□□□ -2.22
TNC-201ENST00000341037 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 70.4 ms