RNA–Protein interactions for RNA: ENST00000340994.4

PKHD1-201, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PKHD1, Length 11,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-201ENST00000340994 KRTAP4-3Q9BYR4 195 aa2.14□□□□□ -2.07
PKHD1-201ENST00000340994 LCE1AQ5T7P2 110 aa2.13□□□□□ -2.07
PKHD1-201ENST00000340994 KRTAP4-9Q9BYQ8 210 aa2.13□□□□□ -2.07
PKHD1-201ENST00000340994 KRTAP17-1Q9BYP8 105 aa2.12□□□□□ -2.07
PKHD1-201ENST00000340994 LRP2P98164 4655 aa2.12□□□□□ -2.07
PKHD1-201ENST00000340994 KMT2CQ8NEZ4 4911 aaKnown RBP2.11□□□□□ -2.07
PKHD1-201ENST00000340994 KRTAP2-2Q9BYT5 123 aa2.11□□□□□ -2.07
PKHD1-201ENST00000340994 KRTAP9-4Q9BYQ2 154 aa2.11□□□□□ -2.07
PKHD1-201ENST00000340994 LCE5AQ5TCM9 118 aa2.1□□□□□ -2.07
PKHD1-201ENST00000340994 KRTAP9-6A8MVA2 160 aa2.09□□□□□ -2.07
PKHD1-201ENST00000340994 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.08
PKHD1-201ENST00000340994 KRTAP9-7A8MTY7 169 aa2.07□□□□□ -2.08
PKHD1-201ENST00000340994 BIRC6Q9NR09 4857 aa2.06□□□□□ -2.08
PKHD1-201ENST00000340994 LCE4AQ5TA78 99 aa2.05□□□□□ -2.08
PKHD1-201ENST00000340994 HERC2O95714 4834 aa2.05□□□□□ -2.08
PKHD1-201ENST00000340994 HERC1Q15751 4861 aa2.03□□□□□ -2.08
PKHD1-201ENST00000340994 RYR2Q92736 4967 aa2.02□□□□□ -2.09
PKHD1-201ENST00000340994 HYDINQ4G0P3 5121 aa2.01□□□□□ -2.09
PKHD1-201ENST00000340994 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
PKHD1-201ENST00000340994 LCE1EQ5T753 118 aa1.97□□□□□ -2.09
PKHD1-201ENST00000340994 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
PKHD1-201ENST00000340994 KIAA1109Q2LD37 5005 aa1.95□□□□□ -2.1
PKHD1-201ENST00000340994 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
PKHD1-201ENST00000340994 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
PKHD1-201ENST00000340994 KRTAP9-6A0A140TA67 174 aa1.91□□□□□ -2.1
PKHD1-201ENST00000340994 LPAP08519 4548 aa1.9□□□□□ -2.1
PKHD1-201ENST00000340994 LCE2AQ5TA79 106 aaPredicted RBP1.9□□□□□ -2.11
PKHD1-201ENST00000340994 SYNE2Q8WXH0 6885 aaKnown RBP1.86□□□□□ -2.11
PKHD1-201ENST00000340994 EPPK1P58107 5090 aaKnown RBP1.82□□□□□ -2.12
PKHD1-201ENST00000340994 SYNE1Q8NF91 8797 aaKnown RBP1.82□□□□□ -2.12
PKHD1-201ENST00000340994 KRTAP9-9Q9BYP9 154 aa1.81□□□□□ -2.12
PKHD1-201ENST00000340994 RNF213Q63HN8 5207 aa1.78□□□□□ -2.12
PKHD1-201ENST00000340994 ABCA13Q86UQ4 5058 aa1.78□□□□□ -2.12
PKHD1-201ENST00000340994 KRTAP4-11Q9BYQ6 195 aa1.78□□□□□ -2.12
PKHD1-201ENST00000340994 HMCN2Q8NDA2 5059 aa1.77□□□□□ -2.13
PKHD1-201ENST00000340994 UBR4Q5T4S7 5183 aa1.71□□□□□ -2.14
PKHD1-201ENST00000340994 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.67□□□□□ -2.14
PKHD1-201ENST00000340994 KRTAP5-5Q701N2 237 aaPredicted RBP1.65□□□□□ -2.14
PKHD1-201ENST00000340994 MUC2Q02817 5179 aa1.65□□□□□ -2.15
PKHD1-201ENST00000340994 FAT4Q6V0I7 4981 aa1.63□□□□□ -2.15
PKHD1-201ENST00000340994 KRTAP5-9P26371 169 aa1.63□□□□□ -2.15
PKHD1-201ENST00000340994 FSIP2Q5CZC0 6907 aa1.63□□□□□ -2.15
PKHD1-201ENST00000340994 KRTAP20-2Q3LI61 65 aa1.59□□□□□ -2.15
PKHD1-201ENST00000340994 KRTAP5-4Q6L8H1 288 aa1.55□□□□□ -2.16
PKHD1-201ENST00000340994 MDN1Q9NU22 5596 aa1.52□□□□□ -2.17
PKHD1-201ENST00000340994 KRTAP4-6Q9BYQ5 205 aa1.5□□□□□ -2.17
PKHD1-201ENST00000340994 KRTAP4-4Q9BYR3 166 aa1.48□□□□□ -2.17
PKHD1-201ENST00000340994 GPR98Q8WXG9 6306 aa1.47□□□□□ -2.17
PKHD1-201ENST00000340994 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
PKHD1-201ENST00000340994 MUC12Q9UKN1 5478 aa1.46□□□□□ -2.18
PKHD1-201ENST00000340994 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
PKHD1-201ENST00000340994 KMT2DO14686 5537 aa1.44□□□□□ -2.18
PKHD1-201ENST00000340994 NEBP20929 6669 aa1.42□□□□□ -2.18
PKHD1-201ENST00000340994 USH2AO75445 5202 aa1.42□□□□□ -2.18
PKHD1-201ENST00000340994 OBSCNQ5VST9 7968 aa1.36□□□□□ -2.19
PKHD1-201ENST00000340994 KRTAP4-12Q9BQ66 201 aa1.35□□□□□ -2.19
PKHD1-201ENST00000340994 KRTAP4-2Q9BYR5 136 aa1.35□□□□□ -2.19
PKHD1-201ENST00000340994 DSTQ03001 7570 aaKnown RBP1.35□□□□□ -2.19
PKHD1-201ENST00000340994 SSPOA2VEC9 5147 aa1.34□□□□□ -2.19
PKHD1-201ENST00000340994 KRTAP5-3Q6L8H2 238 aa1.34□□□□□ -2.19
PKHD1-201ENST00000340994 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
PKHD1-201ENST00000340994 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
PKHD1-201ENST00000340994 MUC5BQ9HC84 5762 aaPredicted RBP1.24□□□□□ -2.21
PKHD1-201ENST00000340994 HMCN1Q96RW7 5635 aa1.22□□□□□ -2.21
PKHD1-201ENST00000340994 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
PKHD1-201ENST00000340994 KRTAP5-2Q701N4 177 aa1.16□□□□□ -2.22
PKHD1-201ENST00000340994 KRTAP5-11Q6L8G4 156 aa1.15□□□□□ -2.23
PKHD1-201ENST00000340994 MUC19Q7Z5P9 8384 aa1.14□□□□□ -2.23
PKHD1-201ENST00000340994 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
PKHD1-201ENST00000340994 KRTAP5-1Q6L8H4 278 aa1.09□□□□□ -2.24
PKHD1-201ENST00000340994 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
PKHD1-201ENST00000340994 PHGR1C9JFL3 82 aa1.05□□□□□ -2.24
PKHD1-201ENST00000340994 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.05□□□□□ -2.24
PKHD1-201ENST00000340994 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
PKHD1-201ENST00000340994 KRTAP5-8O75690 187 aa1.04□□□□□ -2.24
PKHD1-201ENST00000340994 KRTAP5-7Q6L8G8 165 aa0.77□□□□□ -2.29
PKHD1-201ENST00000340994 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms