RNA–Protein interactions for RNA: ENST00000340001.8

ABCA9-201, Transcript of ATP binding cassette subfamily A member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA9, Length 6,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-201ENST00000340001 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
ABCA9-201ENST00000340001 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
ABCA9-201ENST00000340001 LCE1AQ5T7P2 110 aa2.39□□□□□ -2.03
ABCA9-201ENST00000340001 KRTAP4-9Q9BYQ8 210 aa2.38□□□□□ -2.03
ABCA9-201ENST00000340001 MUC17Q685J3 4493 aa2.38□□□□□ -2.03
ABCA9-201ENST00000340001 KRTAP4-3Q9BYR4 195 aa2.38□□□□□ -2.03
ABCA9-201ENST00000340001 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
ABCA9-201ENST00000340001 KRTAP19-2Q3LHN2 52 aa2.35□□□□□ -2.03
ABCA9-201ENST00000340001 KRTAP19-6Q3LI70 58 aa2.34□□□□□ -2.03
ABCA9-201ENST00000340001 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
ABCA9-201ENST00000340001 EPPK1P58107 5090 aaKnown RBP2.31□□□□□ -2.04
ABCA9-201ENST00000340001 KRTAP9-7A8MTY7 169 aa2.31□□□□□ -2.04
ABCA9-201ENST00000340001 MT1LQ93083 61 aa2.31□□□□□ -2.04
ABCA9-201ENST00000340001 PRM1P04553 51 aa2.3□□□□□ -2.04
ABCA9-201ENST00000340001 MT1EP04732 61 aa2.29□□□□□ -2.04
ABCA9-201ENST00000340001 LCE2AQ5TA79 106 aaPredicted RBP2.28□□□□□ -2.04
ABCA9-201ENST00000340001 ABCA13Q86UQ4 5058 aa2.27□□□□□ -2.05
ABCA9-201ENST00000340001 BIRC6Q9NR09 4857 aa2.26□□□□□ -2.05
ABCA9-201ENST00000340001 HMCN2Q8NDA2 5059 aa2.24□□□□□ -2.05
ABCA9-201ENST00000340001 MT3P25713 68 aa2.24□□□□□ -2.05
ABCA9-201ENST00000340001 UBR4Q5T4S7 5183 aa2.24□□□□□ -2.05
ABCA9-201ENST00000340001 MT1MQ8N339 61 aa2.22□□□□□ -2.05
ABCA9-201ENST00000340001 MUC2Q02817 5179 aa2.21□□□□□ -2.06
ABCA9-201ENST00000340001 SYNE1Q8NF91 8797 aaKnown RBP2.15□□□□□ -2.06
ABCA9-201ENST00000340001 FAT4Q6V0I7 4981 aa2.15□□□□□ -2.07
ABCA9-201ENST00000340001 KRTAP19-7Q3SYF9 63 aa2.12□□□□□ -2.07
ABCA9-201ENST00000340001 KRTAP2-3P0C7H8 128 aa2.09□□□□□ -2.07
ABCA9-201ENST00000340001 KRTAP2-4Q9BYR9 128 aa2.09□□□□□ -2.07
ABCA9-201ENST00000340001 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.08□□□□□ -2.08
ABCA9-201ENST00000340001 KMT2DO14686 5537 aa2.06□□□□□ -2.08
ABCA9-201ENST00000340001 KRTAP6-2Q3LI66 62 aa2.06□□□□□ -2.08
ABCA9-201ENST00000340001 KRTAP9-6A8MVA2 160 aa2.05□□□□□ -2.08
ABCA9-201ENST00000340001 OBSCNQ5VST9 7968 aa2.05□□□□□ -2.08
ABCA9-201ENST00000340001 KRTAP2-1Q9BYU5 128 aa2.04□□□□□ -2.08
ABCA9-201ENST00000340001 RNF213Q63HN8 5207 aa2.03□□□□□ -2.08
ABCA9-201ENST00000340001 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
ABCA9-201ENST00000340001 KRTAP2-2Q9BYT5 123 aa2□□□□□ -2.09
ABCA9-201ENST00000340001 MT1AP04731 61 aa1.98□□□□□ -2.09
ABCA9-201ENST00000340001 KRTAP9-9Q9BYP9 154 aa1.97□□□□□ -2.09
ABCA9-201ENST00000340001 MACF1Q9UPN3 7388 aaKnown RBP1.96□□□□□ -2.1
ABCA9-201ENST00000340001 DSTQ03001 7570 aaKnown RBP1.95□□□□□ -2.1
ABCA9-201ENST00000340001 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
ABCA9-201ENST00000340001 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
ABCA9-201ENST00000340001 KRTAP4-6Q9BYQ5 205 aa1.92□□□□□ -2.1
ABCA9-201ENST00000340001 KRTAP4-12Q9BQ66 201 aa1.9□□□□□ -2.11
ABCA9-201ENST00000340001 KRTAP4-2Q9BYR5 136 aa1.9□□□□□ -2.11
ABCA9-201ENST00000340001 KRTAP9-4Q9BYQ2 154 aa1.89□□□□□ -2.11
ABCA9-201ENST00000340001 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
ABCA9-201ENST00000340001 USH2AO75445 5202 aa1.84□□□□□ -2.11
ABCA9-201ENST00000340001 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.12
ABCA9-201ENST00000340001 KRTAP4-11Q9BYQ6 195 aa1.78□□□□□ -2.12
ABCA9-201ENST00000340001 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
ABCA9-201ENST00000340001 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
ABCA9-201ENST00000340001 MUC12Q9UKN1 5478 aa1.68□□□□□ -2.14
ABCA9-201ENST00000340001 NEBP20929 6669 aa1.67□□□□□ -2.14
ABCA9-201ENST00000340001 KRTAP5-9P26371 169 aa1.62□□□□□ -2.15
ABCA9-201ENST00000340001 GPR98Q8WXG9 6306 aa1.52□□□□□ -2.17
ABCA9-201ENST00000340001 KRTAP5-5Q701N2 237 aaPredicted RBP1.52□□□□□ -2.17
ABCA9-201ENST00000340001 KRTAP5-4Q6L8H1 288 aa1.47□□□□□ -2.17
ABCA9-201ENST00000340001 MDN1Q9NU22 5596 aa1.43□□□□□ -2.18
ABCA9-201ENST00000340001 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
ABCA9-201ENST00000340001 KRTAP5-3Q6L8H2 238 aa1.34□□□□□ -2.2
ABCA9-201ENST00000340001 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
ABCA9-201ENST00000340001 KRTAP5-8O75690 187 aa1.27□□□□□ -2.21
ABCA9-201ENST00000340001 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
ABCA9-201ENST00000340001 HMCN1Q96RW7 5635 aa1.18□□□□□ -2.22
ABCA9-201ENST00000340001 KRTAP5-2Q701N4 177 aa1.17□□□□□ -2.22
ABCA9-201ENST00000340001 MUC5BQ9HC84 5762 aaPredicted RBP1.15□□□□□ -2.22
ABCA9-201ENST00000340001 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
ABCA9-201ENST00000340001 AHNAK2Q8IVF2 5795 aa1.13□□□□□ -2.23
ABCA9-201ENST00000340001 KRTAP5-1Q6L8H4 278 aa1.06□□□□□ -2.24
ABCA9-201ENST00000340001 KRTAP5-11Q6L8G4 156 aa1□□□□□ -2.25
ABCA9-201ENST00000340001 KRTAP21-2Q3LI59 83 aa0.99□□□□□ -2.25
ABCA9-201ENST00000340001 AHNAKQ09666 5890 aaKnown RBP0.95□□□□□ -2.26
ABCA9-201ENST00000340001 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
ABCA9-201ENST00000340001 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
ABCA9-201ENST00000340001 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms