RNA–Protein interactions for RNA: ENST00000339362.9

NEO1-202, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEO1, Length 7,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-202ENST00000339362 MUC17Q685J3 4493 aa5.09□□□□□ -1.59
NEO1-202ENST00000339362 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
NEO1-202ENST00000339362 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
NEO1-202ENST00000339362 MT1MQ8N339 61 aa4.94□□□□□ -1.62
NEO1-202ENST00000339362 LCE1CQ5T751 118 aa4.91□□□□□ -1.62
NEO1-202ENST00000339362 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
NEO1-202ENST00000339362 LCE1FQ5T754 118 aa4.91□□□□□ -1.62
NEO1-202ENST00000339362 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
NEO1-202ENST00000339362 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
NEO1-202ENST00000339362 KRTAP4-3Q9BYR4 195 aa4.9□□□□□ -1.63
NEO1-202ENST00000339362 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
NEO1-202ENST00000339362 KRTAP19-6Q3LI70 58 aa4.87□□□□□ -1.63
NEO1-202ENST00000339362 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
NEO1-202ENST00000339362 EPPK1P58107 5090 aaKnown RBP4.77□□□□□ -1.65
NEO1-202ENST00000339362 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
NEO1-202ENST00000339362 FAT4Q6V0I7 4981 aa4.71□□□□□ -1.65
NEO1-202ENST00000339362 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
NEO1-202ENST00000339362 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
NEO1-202ENST00000339362 HMCN2Q8NDA2 5059 aa4.66□□□□□ -1.66
NEO1-202ENST00000339362 LCE2AQ5TA79 106 aaPredicted RBP4.64□□□□□ -1.67
NEO1-202ENST00000339362 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
NEO1-202ENST00000339362 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
NEO1-202ENST00000339362 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
NEO1-202ENST00000339362 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
NEO1-202ENST00000339362 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
NEO1-202ENST00000339362 MT1AP04731 61 aa4.6□□□□□ -1.67
NEO1-202ENST00000339362 UBR4Q5T4S7 5183 aa4.56□□□□□ -1.68
NEO1-202ENST00000339362 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
NEO1-202ENST00000339362 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
NEO1-202ENST00000339362 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
NEO1-202ENST00000339362 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
NEO1-202ENST00000339362 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
NEO1-202ENST00000339362 MUC2Q02817 5179 aa4.31□□□□□ -1.72
NEO1-202ENST00000339362 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
NEO1-202ENST00000339362 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
NEO1-202ENST00000339362 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
NEO1-202ENST00000339362 KRTAP6-3Q3LI67 103 aa4.17□□□□□ -1.74
NEO1-202ENST00000339362 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.11□□□□□ -1.75
NEO1-202ENST00000339362 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
NEO1-202ENST00000339362 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
NEO1-202ENST00000339362 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
NEO1-202ENST00000339362 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
NEO1-202ENST00000339362 USH2AO75445 5202 aa3.92□□□□□ -1.78
NEO1-202ENST00000339362 KMT2DO14686 5537 aa3.88□□□□□ -1.79
NEO1-202ENST00000339362 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
NEO1-202ENST00000339362 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
NEO1-202ENST00000339362 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
NEO1-202ENST00000339362 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
NEO1-202ENST00000339362 SSPOA2VEC9 5147 aa3.65□□□□□ -1.82
NEO1-202ENST00000339362 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
NEO1-202ENST00000339362 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
NEO1-202ENST00000339362 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
NEO1-202ENST00000339362 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
NEO1-202ENST00000339362 NEBP20929 6669 aa3.53□□□□□ -1.84
NEO1-202ENST00000339362 MUC12Q9UKN1 5478 aa3.44□□□□□ -1.86
NEO1-202ENST00000339362 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
NEO1-202ENST00000339362 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
NEO1-202ENST00000339362 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.89
NEO1-202ENST00000339362 MDN1Q9NU22 5596 aa3.17□□□□□ -1.9
NEO1-202ENST00000339362 KRTAP5-3Q6L8H2 238 aa2.79□□□□□ -1.96
NEO1-202ENST00000339362 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
NEO1-202ENST00000339362 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
NEO1-202ENST00000339362 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
NEO1-202ENST00000339362 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
NEO1-202ENST00000339362 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
NEO1-202ENST00000339362 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
NEO1-202ENST00000339362 KRTAP5-8O75690 187 aa2.54□□□□□ -2
NEO1-202ENST00000339362 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
NEO1-202ENST00000339362 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
NEO1-202ENST00000339362 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
NEO1-202ENST00000339362 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
NEO1-202ENST00000339362 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
NEO1-202ENST00000339362 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
NEO1-202ENST00000339362 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
NEO1-202ENST00000339362 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
NEO1-202ENST00000339362 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
NEO1-202ENST00000339362 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 5.2 ms