RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 MT3P25713 68 aa3.65□□□□□ -1.82
SHANK2-201ENST00000338508 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.83
SHANK2-201ENST00000338508 UBR4Q5T4S7 5183 aa3.64□□□□□ -1.83
SHANK2-201ENST00000338508 LCE5AQ5TCM9 118 aa3.63□□□□□ -1.83
SHANK2-201ENST00000338508 KRTAP9-2Q9BYQ4 174 aa3.63□□□□□ -1.83
SHANK2-201ENST00000338508 HMCN2Q8NDA2 5059 aa3.62□□□□□ -1.83
SHANK2-201ENST00000338508 MT1EP04732 61 aa3.61□□□□□ -1.83
SHANK2-201ENST00000338508 MT1MQ8N339 61 aa3.56□□□□□ -1.84
SHANK2-201ENST00000338508 FAT4Q6V0I7 4981 aa3.53□□□□□ -1.84
SHANK2-201ENST00000338508 KRTAP19-2Q3LHN2 52 aa3.53□□□□□ -1.84
SHANK2-201ENST00000338508 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
SHANK2-201ENST00000338508 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
SHANK2-201ENST00000338508 MUC17Q685J3 4493 aa3.49□□□□□ -1.85
SHANK2-201ENST00000338508 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
SHANK2-201ENST00000338508 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
SHANK2-201ENST00000338508 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
SHANK2-201ENST00000338508 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
SHANK2-201ENST00000338508 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
SHANK2-201ENST00000338508 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
SHANK2-201ENST00000338508 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
SHANK2-201ENST00000338508 FSIP2Q5CZC0 6907 aa3.38□□□□□ -1.87
SHANK2-201ENST00000338508 LCE2AQ5TA79 106 aaPredicted RBP3.34□□□□□ -1.87
SHANK2-201ENST00000338508 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
SHANK2-201ENST00000338508 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
SHANK2-201ENST00000338508 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
SHANK2-201ENST00000338508 MT1AP04731 61 aa3.25□□□□□ -1.89
SHANK2-201ENST00000338508 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
SHANK2-201ENST00000338508 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
SHANK2-201ENST00000338508 MUC2Q02817 5179 aa3.19□□□□□ -1.9
SHANK2-201ENST00000338508 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
SHANK2-201ENST00000338508 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
SHANK2-201ENST00000338508 USH2AO75445 5202 aa3.14□□□□□ -1.91
SHANK2-201ENST00000338508 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
SHANK2-201ENST00000338508 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.08□□□□□ -1.92
SHANK2-201ENST00000338508 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
SHANK2-201ENST00000338508 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
SHANK2-201ENST00000338508 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
SHANK2-201ENST00000338508 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
SHANK2-201ENST00000338508 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
SHANK2-201ENST00000338508 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
SHANK2-201ENST00000338508 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
SHANK2-201ENST00000338508 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
SHANK2-201ENST00000338508 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
SHANK2-201ENST00000338508 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
SHANK2-201ENST00000338508 FCGBPQ9Y6R7 5405 aaPredicted RBP2.79□□□□□ -1.96
SHANK2-201ENST00000338508 NEBP20929 6669 aa2.77□□□□□ -1.97
SHANK2-201ENST00000338508 KMT2DO14686 5537 aa2.75□□□□□ -1.97
SHANK2-201ENST00000338508 MACF1Q9UPN3 7388 aaKnown RBP2.75□□□□□ -1.97
SHANK2-201ENST00000338508 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
SHANK2-201ENST00000338508 KRTAP4-6Q9BYQ5 205 aa2.71□□□□□ -1.98
SHANK2-201ENST00000338508 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
SHANK2-201ENST00000338508 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
SHANK2-201ENST00000338508 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
SHANK2-201ENST00000338508 DSTQ03001 7570 aaKnown RBP2.62□□□□□ -1.99
SHANK2-201ENST00000338508 KRTAP5-9P26371 169 aa2.59□□□□□ -1.99
SHANK2-201ENST00000338508 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
SHANK2-201ENST00000338508 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
SHANK2-201ENST00000338508 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
SHANK2-201ENST00000338508 KRTAP5-4Q6L8H1 288 aa2.25□□□□□ -2.05
SHANK2-201ENST00000338508 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
SHANK2-201ENST00000338508 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
SHANK2-201ENST00000338508 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
SHANK2-201ENST00000338508 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
SHANK2-201ENST00000338508 KRTAP5-3Q6L8H2 238 aa2.01□□□□□ -2.09
SHANK2-201ENST00000338508 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
SHANK2-201ENST00000338508 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
SHANK2-201ENST00000338508 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
SHANK2-201ENST00000338508 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
SHANK2-201ENST00000338508 KRTAP5-10Q6L8G5 202 aa1.67□□□□□ -2.14
SHANK2-201ENST00000338508 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.14
SHANK2-201ENST00000338508 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.15
SHANK2-201ENST00000338508 KRTAP5-11Q6L8G4 156 aa1.52□□□□□ -2.17
SHANK2-201ENST00000338508 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
SHANK2-201ENST00000338508 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
SHANK2-201ENST00000338508 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.4□□□□□ -2.19
SHANK2-201ENST00000338508 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
SHANK2-201ENST00000338508 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 9.4 ms