RNA–Protein interactions for RNA: ENST00000338382.10

FOCAD-201, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FOCAD, Length 5,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-201ENST00000338382 MT1AP04731 61 aa2.1□□□□□ -2.07
FOCAD-201ENST00000338382 SPRR2DP22532 72 aa2.1□□□□□ -2.07
FOCAD-201ENST00000338382 HERC2O95714 4834 aa2.1□□□□□ -2.07
FOCAD-201ENST00000338382 KRTAP4-8A0A0G2JLE6 195 aa2.09□□□□□ -2.07
FOCAD-201ENST00000338382 KRTAP4-8Q9BYQ9 185 aa2.09□□□□□ -2.07
FOCAD-201ENST00000338382 KRTAP6-3Q3LI67 103 aa2.09□□□□□ -2.08
FOCAD-201ENST00000338382 KRTAP9-7A8MTY7 169 aa2.08□□□□□ -2.08
FOCAD-201ENST00000338382 KRTAP9-2Q9BYQ4 174 aa2.07□□□□□ -2.08
FOCAD-201ENST00000338382 HMCN2Q8NDA2 5059 aa2.07□□□□□ -2.08
FOCAD-201ENST00000338382 RNF213Q63HN8 5207 aa2.06□□□□□ -2.08
FOCAD-201ENST00000338382 LOC100996750A0A140TA64 210 aa2.05□□□□□ -2.08
FOCAD-201ENST00000338382 KRTAP9-8Q9BYQ0 159 aa2.05□□□□□ -2.08
FOCAD-201ENST00000338382 UBR4Q5T4S7 5183 aa2.05□□□□□ -2.08
FOCAD-201ENST00000338382 LCE1EQ5T753 118 aa2.04□□□□□ -2.08
FOCAD-201ENST00000338382 LCE2AQ5TA79 106 aaPredicted RBP2.04□□□□□ -2.08
FOCAD-201ENST00000338382 KRTAP6-2Q3LI66 62 aa2.03□□□□□ -2.08
FOCAD-201ENST00000338382 KRTAP4-9Q9BYQ8 210 aa2.02□□□□□ -2.09
FOCAD-201ENST00000338382 BIRC6Q9NR09 4857 aa2□□□□□ -2.09
FOCAD-201ENST00000338382 KRTAP9-3Q9BYQ3 159 aa1.98□□□□□ -2.09
FOCAD-201ENST00000338382 LCE1DQ5T752 114 aa1.98□□□□□ -2.09
FOCAD-201ENST00000338382 KRTAP19-7Q3SYF9 63 aa1.97□□□□□ -2.09
FOCAD-201ENST00000338382 KMT2DO14686 5537 aa1.96□□□□□ -2.1
FOCAD-201ENST00000338382 MT1MQ8N339 61 aa1.95□□□□□ -2.1
FOCAD-201ENST00000338382 KRTAP19-3Q7Z4W3 81 aa1.95□□□□□ -2.1
FOCAD-201ENST00000338382 KRTAP4-3Q9BYR4 195 aa1.93□□□□□ -2.1
FOCAD-201ENST00000338382 USH2AO75445 5202 aa1.92□□□□□ -2.1
FOCAD-201ENST00000338382 MT4P47944 62 aa1.9□□□□□ -2.11
FOCAD-201ENST00000338382 LCE1FQ5T754 118 aa1.9□□□□□ -2.11
FOCAD-201ENST00000338382 LCE5AQ5TCM9 118 aa1.87□□□□□ -2.11
FOCAD-201ENST00000338382 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
FOCAD-201ENST00000338382 KRTAP5-5Q701N2 237 aaPredicted RBP1.85□□□□□ -2.11
FOCAD-201ENST00000338382 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
FOCAD-201ENST00000338382 KRTAP20-1Q3LI63 56 aa1.8□□□□□ -2.12
FOCAD-201ENST00000338382 SYNE1Q8NF91 8797 aaKnown RBP1.79□□□□□ -2.12
FOCAD-201ENST00000338382 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
FOCAD-201ENST00000338382 KRTAP9-4Q9BYQ2 154 aa1.72□□□□□ -2.13
FOCAD-201ENST00000338382 FSIP2Q5CZC0 6907 aa1.72□□□□□ -2.13
FOCAD-201ENST00000338382 KRTAP4-11Q9BYQ6 195 aa1.69□□□□□ -2.14
FOCAD-201ENST00000338382 KRTAP19-6Q3LI70 58 aa1.66□□□□□ -2.14
FOCAD-201ENST00000338382 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
FOCAD-201ENST00000338382 FCGBPQ9Y6R7 5405 aaPredicted RBP1.63□□□□□ -2.15
FOCAD-201ENST00000338382 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
FOCAD-201ENST00000338382 DSTQ03001 7570 aaKnown RBP1.61□□□□□ -2.15
FOCAD-201ENST00000338382 SYNE2Q8WXH0 6885 aaKnown RBP1.6□□□□□ -2.15
FOCAD-201ENST00000338382 OBSCNQ5VST9 7968 aa1.57□□□□□ -2.16
FOCAD-201ENST00000338382 LCE4AQ5TA78 99 aa1.56□□□□□ -2.16
FOCAD-201ENST00000338382 GPR98Q8WXG9 6306 aa1.53□□□□□ -2.16
FOCAD-201ENST00000338382 KRTAP9-9Q9BYP9 154 aa1.53□□□□□ -2.16
FOCAD-201ENST00000338382 MDN1Q9NU22 5596 aa1.45□□□□□ -2.18
FOCAD-201ENST00000338382 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.45□□□□□ -2.18
FOCAD-201ENST00000338382 MACF1Q9UPN3 7388 aaKnown RBP1.44□□□□□ -2.18
FOCAD-201ENST00000338382 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
FOCAD-201ENST00000338382 NEBP20929 6669 aa1.38□□□□□ -2.19
FOCAD-201ENST00000338382 KRTAP5-9P26371 169 aa1.32□□□□□ -2.2
FOCAD-201ENST00000338382 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
FOCAD-201ENST00000338382 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
FOCAD-201ENST00000338382 KRTAP4-6Q9BYQ5 205 aa1.27□□□□□ -2.21
FOCAD-201ENST00000338382 KRTAP4-2Q9BYR5 136 aa1.26□□□□□ -2.21
FOCAD-201ENST00000338382 KRTAP5-2Q701N4 177 aa1.25□□□□□ -2.21
FOCAD-201ENST00000338382 KRTAP4-12Q9BQ66 201 aa1.25□□□□□ -2.21
FOCAD-201ENST00000338382 KRTAP4-4Q9BYR3 166 aa1.2□□□□□ -2.22
FOCAD-201ENST00000338382 KRTAP5-4Q6L8H1 288 aa1.2□□□□□ -2.22
FOCAD-201ENST00000338382 MUC19Q7Z5P9 8384 aa1.19□□□□□ -2.22
FOCAD-201ENST00000338382 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
FOCAD-201ENST00000338382 MUC5ACP98088 5654 aa1.07□□□□□ -2.24
FOCAD-201ENST00000338382 KRTAP5-1Q6L8H4 278 aa1.06□□□□□ -2.24
FOCAD-201ENST00000338382 HMCN1Q96RW7 5635 aa1.04□□□□□ -2.24
FOCAD-201ENST00000338382 KRTAP5-3Q6L8H2 238 aa1.01□□□□□ -2.25
FOCAD-201ENST00000338382 AHNAK2Q8IVF2 5795 aa0.98□□□□□ -2.25
FOCAD-201ENST00000338382 KRTAP21-2Q3LI59 83 aa0.98□□□□□ -2.25
FOCAD-201ENST00000338382 KRTAP5-8O75690 187 aa0.92□□□□□ -2.26
FOCAD-201ENST00000338382 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.89□□□□□ -2.27
FOCAD-201ENST00000338382 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
FOCAD-201ENST00000338382 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
FOCAD-201ENST00000338382 KRTAP5-11Q6L8G4 156 aa0.84□□□□□ -2.27
FOCAD-201ENST00000338382 KRTAP5-7Q6L8G8 165 aa0.74□□□□□ -2.29
FOCAD-201ENST00000338382 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 66.3 ms