RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 FAT4Q6V0I7 4981 aa5.4□□□□□ -1.54
TRAPPC11-201ENST00000334690 RNF213Q63HN8 5207 aa5.39□□□□□ -1.55
TRAPPC11-201ENST00000334690 HMCN2Q8NDA2 5059 aa5.35□□□□□ -1.55
TRAPPC11-201ENST00000334690 LCE2AQ5TA79 106 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC11-201ENST00000334690 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
TRAPPC11-201ENST00000334690 FSIP2Q5CZC0 6907 aa5.24□□□□□ -1.57
TRAPPC11-201ENST00000334690 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
TRAPPC11-201ENST00000334690 MT3P25713 68 aa5.19□□□□□ -1.58
TRAPPC11-201ENST00000334690 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
TRAPPC11-201ENST00000334690 KRTAP2-3P0C7H8 128 aa5.11□□□□□ -1.59
TRAPPC11-201ENST00000334690 KRTAP2-4Q9BYR9 128 aa5.11□□□□□ -1.59
TRAPPC11-201ENST00000334690 KRTAP2-1Q9BYU5 128 aa5.11□□□□□ -1.59
TRAPPC11-201ENST00000334690 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
TRAPPC11-201ENST00000334690 MUC2Q02817 5179 aa5.09□□□□□ -1.59
TRAPPC11-201ENST00000334690 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
TRAPPC11-201ENST00000334690 MT1AP04731 61 aa5.04□□□□□ -1.6
TRAPPC11-201ENST00000334690 PRM1P04553 51 aa5□□□□□ -1.61
TRAPPC11-201ENST00000334690 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
TRAPPC11-201ENST00000334690 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
TRAPPC11-201ENST00000334690 MT4P47944 62 aa4.9□□□□□ -1.63
TRAPPC11-201ENST00000334690 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
TRAPPC11-201ENST00000334690 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
TRAPPC11-201ENST00000334690 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
TRAPPC11-201ENST00000334690 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
TRAPPC11-201ENST00000334690 LCE1BQ5T7P3 118 aa4.72□□□□□ -1.65
TRAPPC11-201ENST00000334690 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
TRAPPC11-201ENST00000334690 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-201ENST00000334690 KRTAP9-6A0A140TA67 174 aa4.66□□□□□ -1.66
TRAPPC11-201ENST00000334690 SYNE2Q8WXH0 6885 aaKnown RBP4.65□□□□□ -1.66
TRAPPC11-201ENST00000334690 USH2AO75445 5202 aa4.65□□□□□ -1.67
TRAPPC11-201ENST00000334690 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
TRAPPC11-201ENST00000334690 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
TRAPPC11-201ENST00000334690 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
TRAPPC11-201ENST00000334690 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
TRAPPC11-201ENST00000334690 KRTAP9-7A8MTY7 169 aa4.46□□□□□ -1.7
TRAPPC11-201ENST00000334690 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
TRAPPC11-201ENST00000334690 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC11-201ENST00000334690 KRTAP20-1Q3LI63 56 aa4.39□□□□□ -1.71
TRAPPC11-201ENST00000334690 KMT2DO14686 5537 aa4.35□□□□□ -1.71
TRAPPC11-201ENST00000334690 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
TRAPPC11-201ENST00000334690 MACF1Q9UPN3 7388 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-201ENST00000334690 MUC12Q9UKN1 5478 aa4.2□□□□□ -1.74
TRAPPC11-201ENST00000334690 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
TRAPPC11-201ENST00000334690 SSPOA2VEC9 5147 aa4.15□□□□□ -1.74
TRAPPC11-201ENST00000334690 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
TRAPPC11-201ENST00000334690 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
TRAPPC11-201ENST00000334690 NEBP20929 6669 aa3.87□□□□□ -1.79
TRAPPC11-201ENST00000334690 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
TRAPPC11-201ENST00000334690 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
TRAPPC11-201ENST00000334690 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
TRAPPC11-201ENST00000334690 KRTAP4-6Q9BYQ5 205 aa3.84□□□□□ -1.79
TRAPPC11-201ENST00000334690 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
TRAPPC11-201ENST00000334690 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
TRAPPC11-201ENST00000334690 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
TRAPPC11-201ENST00000334690 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.82
TRAPPC11-201ENST00000334690 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
TRAPPC11-201ENST00000334690 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
TRAPPC11-201ENST00000334690 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
TRAPPC11-201ENST00000334690 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
TRAPPC11-201ENST00000334690 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
TRAPPC11-201ENST00000334690 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
TRAPPC11-201ENST00000334690 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
TRAPPC11-201ENST00000334690 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
TRAPPC11-201ENST00000334690 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
TRAPPC11-201ENST00000334690 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
TRAPPC11-201ENST00000334690 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
TRAPPC11-201ENST00000334690 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
TRAPPC11-201ENST00000334690 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
TRAPPC11-201ENST00000334690 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
TRAPPC11-201ENST00000334690 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
TRAPPC11-201ENST00000334690 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
TRAPPC11-201ENST00000334690 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
TRAPPC11-201ENST00000334690 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC11-201ENST00000334690 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
TRAPPC11-201ENST00000334690 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
TRAPPC11-201ENST00000334690 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
TRAPPC11-201ENST00000334690 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 8.4 ms