RNA–Protein interactions for RNA: ENST00000333535.8

SCN5A-202, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN5A, Length 8,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-202ENST00000333535 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
SCN5A-202ENST00000333535 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
SCN5A-202ENST00000333535 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
SCN5A-202ENST00000333535 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
SCN5A-202ENST00000333535 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
SCN5A-202ENST00000333535 KMT2CQ8NEZ4 4911 aaKnown RBP3.22□□□□□ -1.89
SCN5A-202ENST00000333535 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
SCN5A-202ENST00000333535 KRTAP9-6A0A140TA67 174 aa3.2□□□□□ -1.9
SCN5A-202ENST00000333535 LCE2AQ5TA79 106 aaPredicted RBP3.18□□□□□ -1.9
SCN5A-202ENST00000333535 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
SCN5A-202ENST00000333535 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
SCN5A-202ENST00000333535 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
SCN5A-202ENST00000333535 HYDINQ4G0P3 5121 aa3.16□□□□□ -1.9
SCN5A-202ENST00000333535 KRTAP6-2Q3LI66 62 aa3.16□□□□□ -1.9
SCN5A-202ENST00000333535 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
SCN5A-202ENST00000333535 KRTAP4-9Q9BYQ8 210 aa3.14□□□□□ -1.91
SCN5A-202ENST00000333535 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
SCN5A-202ENST00000333535 RYR2Q92736 4967 aa3.12□□□□□ -1.91
SCN5A-202ENST00000333535 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
SCN5A-202ENST00000333535 KRTAP9-7A8MTY7 169 aa3.06□□□□□ -1.92
SCN5A-202ENST00000333535 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
SCN5A-202ENST00000333535 BIRC6Q9NR09 4857 aa3.02□□□□□ -1.93
SCN5A-202ENST00000333535 HERC2O95714 4834 aa3.01□□□□□ -1.93
SCN5A-202ENST00000333535 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
SCN5A-202ENST00000333535 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
SCN5A-202ENST00000333535 HERC1Q15751 4861 aa2.99□□□□□ -1.93
SCN5A-202ENST00000333535 HMCN2Q8NDA2 5059 aa2.98□□□□□ -1.93
SCN5A-202ENST00000333535 PCLOQ9Y6V0 5065 aa2.95□□□□□ -1.94
SCN5A-202ENST00000333535 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.92□□□□□ -1.94
SCN5A-202ENST00000333535 KIAA1109Q2LD37 5005 aa2.9□□□□□ -1.95
SCN5A-202ENST00000333535 EPPK1P58107 5090 aaKnown RBP2.89□□□□□ -1.95
SCN5A-202ENST00000333535 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
SCN5A-202ENST00000333535 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
SCN5A-202ENST00000333535 RNF213Q63HN8 5207 aa2.75□□□□□ -1.97
SCN5A-202ENST00000333535 ABCA13Q86UQ4 5058 aa2.74□□□□□ -1.97
SCN5A-202ENST00000333535 UBR4Q5T4S7 5183 aa2.72□□□□□ -1.97
SCN5A-202ENST00000333535 FSIP2Q5CZC0 6907 aa2.65□□□□□ -1.99
SCN5A-202ENST00000333535 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
SCN5A-202ENST00000333535 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
SCN5A-202ENST00000333535 FAT4Q6V0I7 4981 aa2.58□□□□□ -2
SCN5A-202ENST00000333535 MUC2Q02817 5179 aa2.54□□□□□ -2
SCN5A-202ENST00000333535 KMT2DO14686 5537 aa2.52□□□□□ -2.01
SCN5A-202ENST00000333535 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
SCN5A-202ENST00000333535 KRTAP4-6Q9BYQ5 205 aa2.46□□□□□ -2.02
SCN5A-202ENST00000333535 USH2AO75445 5202 aa2.42□□□□□ -2.02
SCN5A-202ENST00000333535 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
SCN5A-202ENST00000333535 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
SCN5A-202ENST00000333535 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
SCN5A-202ENST00000333535 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
SCN5A-202ENST00000333535 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
SCN5A-202ENST00000333535 NEBP20929 6669 aa2.21□□□□□ -2.05
SCN5A-202ENST00000333535 SSPOA2VEC9 5147 aa2.19□□□□□ -2.06
SCN5A-202ENST00000333535 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
SCN5A-202ENST00000333535 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
SCN5A-202ENST00000333535 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
SCN5A-202ENST00000333535 MACF1Q9UPN3 7388 aaKnown RBP2.09□□□□□ -2.08
SCN5A-202ENST00000333535 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
SCN5A-202ENST00000333535 MDN1Q9NU22 5596 aa2.03□□□□□ -2.08
SCN5A-202ENST00000333535 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
SCN5A-202ENST00000333535 MUC12Q9UKN1 5478 aa1.92□□□□□ -2.1
SCN5A-202ENST00000333535 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
SCN5A-202ENST00000333535 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
SCN5A-202ENST00000333535 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
SCN5A-202ENST00000333535 GPR98Q8WXG9 6306 aa1.78□□□□□ -2.12
SCN5A-202ENST00000333535 PHGR1C9JFL3 82 aa1.78□□□□□ -2.13
SCN5A-202ENST00000333535 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
SCN5A-202ENST00000333535 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
SCN5A-202ENST00000333535 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
SCN5A-202ENST00000333535 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.15
SCN5A-202ENST00000333535 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
SCN5A-202ENST00000333535 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
SCN5A-202ENST00000333535 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
SCN5A-202ENST00000333535 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
SCN5A-202ENST00000333535 AHNAK2Q8IVF2 5795 aa1.39□□□□□ -2.19
SCN5A-202ENST00000333535 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
SCN5A-202ENST00000333535 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
SCN5A-202ENST00000333535 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 39.5 ms