RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 FLGP20930 4061 aaPredicted RBP5.16□□□□□ -1.58
NSMCE3-201ENST00000332303 MT3P25713 68 aa5.16□□□□□ -1.58
NSMCE3-201ENST00000332303 TNXBP22105 4242 aa5.08□□□□□ -1.6
NSMCE3-201ENST00000332303 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
NSMCE3-201ENST00000332303 KRTAP9-2Q9BYQ4 174 aa5.01□□□□□ -1.61
NSMCE3-201ENST00000332303 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
NSMCE3-201ENST00000332303 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
NSMCE3-201ENST00000332303 MT4P47944 62 aa4.99□□□□□ -1.61
NSMCE3-201ENST00000332303 FAT4Q6V0I7 4981 aa4.99□□□□□ -1.61
NSMCE3-201ENST00000332303 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
NSMCE3-201ENST00000332303 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
NSMCE3-201ENST00000332303 LCE2AQ5TA79 106 aaPredicted RBP4.98□□□□□ -1.61
NSMCE3-201ENST00000332303 MUC2Q02817 5179 aa4.94□□□□□ -1.62
NSMCE3-201ENST00000332303 PRM1P04553 51 aa4.92□□□□□ -1.62
NSMCE3-201ENST00000332303 HMCN2Q8NDA2 5059 aa4.91□□□□□ -1.62
NSMCE3-201ENST00000332303 MT1AP04731 61 aa4.88□□□□□ -1.63
NSMCE3-201ENST00000332303 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
NSMCE3-201ENST00000332303 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
NSMCE3-201ENST00000332303 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
NSMCE3-201ENST00000332303 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
NSMCE3-201ENST00000332303 KRTAP2-1Q9BYU5 128 aa4.75□□□□□ -1.65
NSMCE3-201ENST00000332303 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.66
NSMCE3-201ENST00000332303 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
NSMCE3-201ENST00000332303 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
NSMCE3-201ENST00000332303 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
NSMCE3-201ENST00000332303 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
NSMCE3-201ENST00000332303 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
NSMCE3-201ENST00000332303 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
NSMCE3-201ENST00000332303 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
NSMCE3-201ENST00000332303 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
NSMCE3-201ENST00000332303 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
NSMCE3-201ENST00000332303 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
NSMCE3-201ENST00000332303 KRTAP9-7A8MTY7 169 aa4.51□□□□□ -1.69
NSMCE3-201ENST00000332303 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.7
NSMCE3-201ENST00000332303 USH2AO75445 5202 aa4.46□□□□□ -1.7
NSMCE3-201ENST00000332303 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
NSMCE3-201ENST00000332303 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
NSMCE3-201ENST00000332303 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
NSMCE3-201ENST00000332303 KMT2DO14686 5537 aa4.36□□□□□ -1.71
NSMCE3-201ENST00000332303 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
NSMCE3-201ENST00000332303 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
NSMCE3-201ENST00000332303 MUC19Q7Z5P9 8384 aa4.14□□□□□ -1.75
NSMCE3-201ENST00000332303 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
NSMCE3-201ENST00000332303 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
NSMCE3-201ENST00000332303 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
NSMCE3-201ENST00000332303 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
NSMCE3-201ENST00000332303 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
NSMCE3-201ENST00000332303 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
NSMCE3-201ENST00000332303 NEBP20929 6669 aa3.89□□□□□ -1.79
NSMCE3-201ENST00000332303 SSPOA2VEC9 5147 aa3.88□□□□□ -1.79
NSMCE3-201ENST00000332303 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
NSMCE3-201ENST00000332303 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
NSMCE3-201ENST00000332303 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.82
NSMCE3-201ENST00000332303 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
NSMCE3-201ENST00000332303 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
NSMCE3-201ENST00000332303 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
NSMCE3-201ENST00000332303 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
NSMCE3-201ENST00000332303 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
NSMCE3-201ENST00000332303 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
NSMCE3-201ENST00000332303 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
NSMCE3-201ENST00000332303 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
NSMCE3-201ENST00000332303 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
NSMCE3-201ENST00000332303 AHNAK2Q8IVF2 5795 aa3.13□□□□□ -1.91
NSMCE3-201ENST00000332303 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
NSMCE3-201ENST00000332303 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
NSMCE3-201ENST00000332303 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
NSMCE3-201ENST00000332303 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
NSMCE3-201ENST00000332303 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
NSMCE3-201ENST00000332303 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
NSMCE3-201ENST00000332303 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
NSMCE3-201ENST00000332303 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
NSMCE3-201ENST00000332303 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
NSMCE3-201ENST00000332303 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
NSMCE3-201ENST00000332303 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
NSMCE3-201ENST00000332303 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
NSMCE3-201ENST00000332303 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
NSMCE3-201ENST00000332303 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 228.4 ms