RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
CLN8-201ENST00000331222 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
CLN8-201ENST00000331222 PRM1P04553 51 aa3.37□□□□□ -1.87
CLN8-201ENST00000331222 USH2AO75445 5202 aa3.36□□□□□ -1.87
CLN8-201ENST00000331222 UBR4Q5T4S7 5183 aa3.33□□□□□ -1.88
CLN8-201ENST00000331222 FSIP2Q5CZC0 6907 aa3.33□□□□□ -1.88
CLN8-201ENST00000331222 KRTAP9-2Q9BYQ4 174 aa3.33□□□□□ -1.88
CLN8-201ENST00000331222 MT1LQ93083 61 aa3.3□□□□□ -1.88
CLN8-201ENST00000331222 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
CLN8-201ENST00000331222 LCE5AQ5TCM9 118 aa3.27□□□□□ -1.89
CLN8-201ENST00000331222 MT1EP04732 61 aa3.26□□□□□ -1.89
CLN8-201ENST00000331222 FAT4Q6V0I7 4981 aa3.25□□□□□ -1.89
CLN8-201ENST00000331222 KRTAP4-9Q9BYQ8 210 aa3.24□□□□□ -1.89
CLN8-201ENST00000331222 MT3P25713 68 aa3.22□□□□□ -1.89
CLN8-201ENST00000331222 MT1MQ8N339 61 aa3.2□□□□□ -1.9
CLN8-201ENST00000331222 KRTAP19-6Q3LI70 58 aa3.2□□□□□ -1.9
CLN8-201ENST00000331222 KRTAP9-6A0A140TA67 174 aa3.18□□□□□ -1.9
CLN8-201ENST00000331222 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
CLN8-201ENST00000331222 MUC2Q02817 5179 aa3.1□□□□□ -1.91
CLN8-201ENST00000331222 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
CLN8-201ENST00000331222 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
CLN8-201ENST00000331222 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
CLN8-201ENST00000331222 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
CLN8-201ENST00000331222 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
CLN8-201ENST00000331222 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
CLN8-201ENST00000331222 LCE2AQ5TA79 106 aaPredicted RBP2.99□□□□□ -1.93
CLN8-201ENST00000331222 SSPOA2VEC9 5147 aa2.98□□□□□ -1.93
CLN8-201ENST00000331222 KRTAP9-7A8MTY7 169 aa2.97□□□□□ -1.93
CLN8-201ENST00000331222 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
CLN8-201ENST00000331222 KRTAP2-3P0C7H8 128 aa2.96□□□□□ -1.94
CLN8-201ENST00000331222 KRTAP2-4Q9BYR9 128 aa2.96□□□□□ -1.94
CLN8-201ENST00000331222 KRTAP2-1Q9BYU5 128 aa2.96□□□□□ -1.94
CLN8-201ENST00000331222 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
CLN8-201ENST00000331222 NEBP20929 6669 aa2.91□□□□□ -1.94
CLN8-201ENST00000331222 KRTAP19-7Q3SYF9 63 aa2.91□□□□□ -1.94
CLN8-201ENST00000331222 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
CLN8-201ENST00000331222 MT1AP04731 61 aa2.88□□□□□ -1.95
CLN8-201ENST00000331222 KMT2DO14686 5537 aa2.87□□□□□ -1.95
CLN8-201ENST00000331222 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
CLN8-201ENST00000331222 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
CLN8-201ENST00000331222 LCE4AQ5TA78 99 aa2.84□□□□□ -1.96
CLN8-201ENST00000331222 FCGBPQ9Y6R7 5405 aaPredicted RBP2.79□□□□□ -1.96
CLN8-201ENST00000331222 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
CLN8-201ENST00000331222 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.77□□□□□ -1.97
CLN8-201ENST00000331222 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
CLN8-201ENST00000331222 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
CLN8-201ENST00000331222 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
CLN8-201ENST00000331222 KRTAP2-2Q9BYT5 123 aa2.7□□□□□ -1.98
CLN8-201ENST00000331222 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
CLN8-201ENST00000331222 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
CLN8-201ENST00000331222 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
CLN8-201ENST00000331222 KRTAP4-6Q9BYQ5 205 aa2.57□□□□□ -2
CLN8-201ENST00000331222 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
CLN8-201ENST00000331222 MUC12Q9UKN1 5478 aa2.56□□□□□ -2
CLN8-201ENST00000331222 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
CLN8-201ENST00000331222 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
CLN8-201ENST00000331222 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
CLN8-201ENST00000331222 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
CLN8-201ENST00000331222 KRTAP4-2Q9BYR5 136 aa2.51□□□□□ -2.01
CLN8-201ENST00000331222 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
CLN8-201ENST00000331222 KRTAP5-9P26371 169 aa2.38□□□□□ -2.03
CLN8-201ENST00000331222 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
CLN8-201ENST00000331222 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
CLN8-201ENST00000331222 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
CLN8-201ENST00000331222 KRTAP5-4Q6L8H1 288 aa2.03□□□□□ -2.08
CLN8-201ENST00000331222 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
CLN8-201ENST00000331222 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
CLN8-201ENST00000331222 KRTAP5-3Q6L8H2 238 aa1.82□□□□□ -2.12
CLN8-201ENST00000331222 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
CLN8-201ENST00000331222 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
CLN8-201ENST00000331222 KRTAP5-10Q6L8G5 202 aa1.7□□□□□ -2.14
CLN8-201ENST00000331222 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
CLN8-201ENST00000331222 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
CLN8-201ENST00000331222 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
CLN8-201ENST00000331222 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
CLN8-201ENST00000331222 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
CLN8-201ENST00000331222 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 114.1 ms