RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
RAB11FIP1-202ENST00000330843 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
RAB11FIP1-202ENST00000330843 KRTAP2-1Q9BYU5 128 aa3.57□□□□□ -1.84
RAB11FIP1-202ENST00000330843 HERC2O95714 4834 aa3.55□□□□□ -1.84
RAB11FIP1-202ENST00000330843 HERC1Q15751 4861 aa3.54□□□□□ -1.84
RAB11FIP1-202ENST00000330843 HYDINQ4G0P3 5121 aa3.54□□□□□ -1.84
RAB11FIP1-202ENST00000330843 BIRC6Q9NR09 4857 aa3.52□□□□□ -1.85
RAB11FIP1-202ENST00000330843 MUC17Q685J3 4493 aa3.52□□□□□ -1.85
RAB11FIP1-202ENST00000330843 KRTAP19-2Q3LHN2 52 aa3.5□□□□□ -1.85
RAB11FIP1-202ENST00000330843 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
RAB11FIP1-202ENST00000330843 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
RAB11FIP1-202ENST00000330843 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
RAB11FIP1-202ENST00000330843 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
RAB11FIP1-202ENST00000330843 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
RAB11FIP1-202ENST00000330843 PCLOQ9Y6V0 5065 aa3.43□□□□□ -1.86
RAB11FIP1-202ENST00000330843 MT1AP04731 61 aa3.43□□□□□ -1.86
RAB11FIP1-202ENST00000330843 KRTAP19-6Q3LI70 58 aa3.41□□□□□ -1.86
RAB11FIP1-202ENST00000330843 KMT2CQ8NEZ4 4911 aaKnown RBP3.39□□□□□ -1.87
RAB11FIP1-202ENST00000330843 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
RAB11FIP1-202ENST00000330843 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
RAB11FIP1-202ENST00000330843 KRTAP9-2Q9BYQ4 174 aa3.32□□□□□ -1.88
RAB11FIP1-202ENST00000330843 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
RAB11FIP1-202ENST00000330843 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.89
RAB11FIP1-202ENST00000330843 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
RAB11FIP1-202ENST00000330843 EPPK1P58107 5090 aaKnown RBP3.23□□□□□ -1.89
RAB11FIP1-202ENST00000330843 ABCA13Q86UQ4 5058 aa3.22□□□□□ -1.89
RAB11FIP1-202ENST00000330843 KRTAP4-11Q9BYQ6 195 aa3.16□□□□□ -1.9
RAB11FIP1-202ENST00000330843 HMCN2Q8NDA2 5059 aa3.13□□□□□ -1.91
RAB11FIP1-202ENST00000330843 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
RAB11FIP1-202ENST00000330843 LCE2AQ5TA79 106 aaPredicted RBP3.1□□□□□ -1.91
RAB11FIP1-202ENST00000330843 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
RAB11FIP1-202ENST00000330843 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
RAB11FIP1-202ENST00000330843 RNF213Q63HN8 5207 aa3.05□□□□□ -1.92
RAB11FIP1-202ENST00000330843 UBR4Q5T4S7 5183 aa3.03□□□□□ -1.92
RAB11FIP1-202ENST00000330843 FSIP2Q5CZC0 6907 aa2.98□□□□□ -1.93
RAB11FIP1-202ENST00000330843 KRTAP9-6A0A140TA67 174 aa2.97□□□□□ -1.93
RAB11FIP1-202ENST00000330843 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
RAB11FIP1-202ENST00000330843 MUC2Q02817 5179 aa2.88□□□□□ -1.95
RAB11FIP1-202ENST00000330843 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
RAB11FIP1-202ENST00000330843 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
RAB11FIP1-202ENST00000330843 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
RAB11FIP1-202ENST00000330843 KRTAP6-3Q3LI67 103 aa2.82□□□□□ -1.96
RAB11FIP1-202ENST00000330843 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
RAB11FIP1-202ENST00000330843 KMT2DO14686 5537 aa2.73□□□□□ -1.97
RAB11FIP1-202ENST00000330843 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
RAB11FIP1-202ENST00000330843 KRTAP4-6Q9BYQ5 205 aa2.7□□□□□ -1.98
RAB11FIP1-202ENST00000330843 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
RAB11FIP1-202ENST00000330843 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
RAB11FIP1-202ENST00000330843 FCGBPQ9Y6R7 5405 aaPredicted RBP2.6□□□□□ -1.99
RAB11FIP1-202ENST00000330843 USH2AO75445 5202 aa2.58□□□□□ -2
RAB11FIP1-202ENST00000330843 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
RAB11FIP1-202ENST00000330843 KRTAP5-9P26371 169 aa2.41□□□□□ -2.02
RAB11FIP1-202ENST00000330843 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
RAB11FIP1-202ENST00000330843 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
RAB11FIP1-202ENST00000330843 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
RAB11FIP1-202ENST00000330843 NEBP20929 6669 aa2.31□□□□□ -2.04
RAB11FIP1-202ENST00000330843 MUC12Q9UKN1 5478 aa2.28□□□□□ -2.04
RAB11FIP1-202ENST00000330843 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
RAB11FIP1-202ENST00000330843 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
RAB11FIP1-202ENST00000330843 GPR98Q8WXG9 6306 aa2□□□□□ -2.09
RAB11FIP1-202ENST00000330843 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
RAB11FIP1-202ENST00000330843 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
RAB11FIP1-202ENST00000330843 KRTAP5-3Q6L8H2 238 aa1.87□□□□□ -2.11
RAB11FIP1-202ENST00000330843 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
RAB11FIP1-202ENST00000330843 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
RAB11FIP1-202ENST00000330843 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
RAB11FIP1-202ENST00000330843 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
RAB11FIP1-202ENST00000330843 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
RAB11FIP1-202ENST00000330843 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
RAB11FIP1-202ENST00000330843 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
RAB11FIP1-202ENST00000330843 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
RAB11FIP1-202ENST00000330843 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.17
RAB11FIP1-202ENST00000330843 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
RAB11FIP1-202ENST00000330843 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
RAB11FIP1-202ENST00000330843 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
RAB11FIP1-202ENST00000330843 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.33□□□□□ -2.2
RAB11FIP1-202ENST00000330843 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 145.1 ms