RNA–Protein interactions for RNA: ENST00000329798.5

FREM3-201, Transcript of FRAS1 related extracellular matrix 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FREM3, Length 6,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3-201ENST00000329798 MUC17Q685J3 4493 aa4.01□□□□□ -1.77
FREM3-201ENST00000329798 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.01□□□□□ -1.77
FREM3-201ENST00000329798 MT1MQ8N339 61 aa3.99□□□□□ -1.77
FREM3-201ENST00000329798 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
FREM3-201ENST00000329798 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
FREM3-201ENST00000329798 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
FREM3-201ENST00000329798 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
FREM3-201ENST00000329798 FSIP2Q5CZC0 6907 aa3.97□□□□□ -1.77
FREM3-201ENST00000329798 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
FREM3-201ENST00000329798 MT3P25713 68 aa3.95□□□□□ -1.78
FREM3-201ENST00000329798 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
FREM3-201ENST00000329798 ABCA13Q86UQ4 5058 aa3.91□□□□□ -1.78
FREM3-201ENST00000329798 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
FREM3-201ENST00000329798 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.78
FREM3-201ENST00000329798 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
FREM3-201ENST00000329798 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
FREM3-201ENST00000329798 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
FREM3-201ENST00000329798 LCE5AQ5TCM9 118 aa3.82□□□□□ -1.8
FREM3-201ENST00000329798 UBR4Q5T4S7 5183 aa3.82□□□□□ -1.8
FREM3-201ENST00000329798 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
FREM3-201ENST00000329798 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
FREM3-201ENST00000329798 FAT4Q6V0I7 4981 aa3.82□□□□□ -1.8
FREM3-201ENST00000329798 RNF213Q63HN8 5207 aa3.74□□□□□ -1.81
FREM3-201ENST00000329798 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
FREM3-201ENST00000329798 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
FREM3-201ENST00000329798 MUC2Q02817 5179 aa3.66□□□□□ -1.82
FREM3-201ENST00000329798 MT1AP04731 61 aa3.64□□□□□ -1.83
FREM3-201ENST00000329798 PRM1P04553 51 aa3.64□□□□□ -1.83
FREM3-201ENST00000329798 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
FREM3-201ENST00000329798 HMCN2Q8NDA2 5059 aa3.61□□□□□ -1.83
FREM3-201ENST00000329798 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
FREM3-201ENST00000329798 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
FREM3-201ENST00000329798 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
FREM3-201ENST00000329798 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
FREM3-201ENST00000329798 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
FREM3-201ENST00000329798 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
FREM3-201ENST00000329798 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
FREM3-201ENST00000329798 KRTAP9-9Q9BYP9 154 aa3.4□□□□□ -1.86
FREM3-201ENST00000329798 NEBP20929 6669 aa3.25□□□□□ -1.89
FREM3-201ENST00000329798 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
FREM3-201ENST00000329798 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
FREM3-201ENST00000329798 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
FREM3-201ENST00000329798 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
FREM3-201ENST00000329798 KRTAP4-6Q9BYQ5 205 aa3.12□□□□□ -1.91
FREM3-201ENST00000329798 SSPOA2VEC9 5147 aa3.06□□□□□ -1.92
FREM3-201ENST00000329798 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
FREM3-201ENST00000329798 USH2AO75445 5202 aa3.03□□□□□ -1.92
FREM3-201ENST00000329798 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
FREM3-201ENST00000329798 KMT2DO14686 5537 aa3□□□□□ -1.93
FREM3-201ENST00000329798 FCGBPQ9Y6R7 5405 aaPredicted RBP2.95□□□□□ -1.94
FREM3-201ENST00000329798 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
FREM3-201ENST00000329798 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
FREM3-201ENST00000329798 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
FREM3-201ENST00000329798 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.96
FREM3-201ENST00000329798 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
FREM3-201ENST00000329798 KRTAP4-11Q9BYQ6 195 aa2.79□□□□□ -1.96
FREM3-201ENST00000329798 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
FREM3-201ENST00000329798 MUC12Q9UKN1 5478 aa2.68□□□□□ -1.98
FREM3-201ENST00000329798 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
FREM3-201ENST00000329798 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
FREM3-201ENST00000329798 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
FREM3-201ENST00000329798 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
FREM3-201ENST00000329798 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
FREM3-201ENST00000329798 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
FREM3-201ENST00000329798 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
FREM3-201ENST00000329798 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
FREM3-201ENST00000329798 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
FREM3-201ENST00000329798 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
FREM3-201ENST00000329798 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
FREM3-201ENST00000329798 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
FREM3-201ENST00000329798 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
FREM3-201ENST00000329798 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
FREM3-201ENST00000329798 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
FREM3-201ENST00000329798 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
FREM3-201ENST00000329798 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
FREM3-201ENST00000329798 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.49□□□□□ -2.17
FREM3-201ENST00000329798 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 91.1 ms