RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
PCM1-201ENST00000325083 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
PCM1-201ENST00000325083 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
PCM1-201ENST00000325083 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
PCM1-201ENST00000325083 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
PCM1-201ENST00000325083 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
PCM1-201ENST00000325083 MT1AP04731 61 aa3.93□□□□□ -1.78
PCM1-201ENST00000325083 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
PCM1-201ENST00000325083 KRTAP19-2Q3LHN2 52 aa3.87□□□□□ -1.79
PCM1-201ENST00000325083 LRP2P98164 4655 aa3.86□□□□□ -1.79
PCM1-201ENST00000325083 HERC1Q15751 4861 aa3.86□□□□□ -1.79
PCM1-201ENST00000325083 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
PCM1-201ENST00000325083 KMT2CQ8NEZ4 4911 aaKnown RBP3.85□□□□□ -1.79
PCM1-201ENST00000325083 HYDINQ4G0P3 5121 aa3.81□□□□□ -1.8
PCM1-201ENST00000325083 KRTAP19-7Q3SYF9 63 aa3.77□□□□□ -1.81
PCM1-201ENST00000325083 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
PCM1-201ENST00000325083 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
PCM1-201ENST00000325083 RYR2Q92736 4967 aa3.74□□□□□ -1.81
PCM1-201ENST00000325083 HERC2O95714 4834 aa3.73□□□□□ -1.81
PCM1-201ENST00000325083 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
PCM1-201ENST00000325083 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
PCM1-201ENST00000325083 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
PCM1-201ENST00000325083 PCLOQ9Y6V0 5065 aa3.6□□□□□ -1.83
PCM1-201ENST00000325083 EPPK1P58107 5090 aaKnown RBP3.59□□□□□ -1.83
PCM1-201ENST00000325083 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
PCM1-201ENST00000325083 BIRC6Q9NR09 4857 aa3.51□□□□□ -1.85
PCM1-201ENST00000325083 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
PCM1-201ENST00000325083 LCE2AQ5TA79 106 aaPredicted RBP3.48□□□□□ -1.85
PCM1-201ENST00000325083 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
PCM1-201ENST00000325083 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.44□□□□□ -1.86
PCM1-201ENST00000325083 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
PCM1-201ENST00000325083 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.87
PCM1-201ENST00000325083 FSIP2Q5CZC0 6907 aa3.4□□□□□ -1.87
PCM1-201ENST00000325083 ABCA13Q86UQ4 5058 aa3.39□□□□□ -1.87
PCM1-201ENST00000325083 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
PCM1-201ENST00000325083 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
PCM1-201ENST00000325083 UBR4Q5T4S7 5183 aa3.32□□□□□ -1.88
PCM1-201ENST00000325083 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
PCM1-201ENST00000325083 RNF213Q63HN8 5207 aa3.21□□□□□ -1.9
PCM1-201ENST00000325083 FAT4Q6V0I7 4981 aa3.21□□□□□ -1.9
PCM1-201ENST00000325083 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
PCM1-201ENST00000325083 MUC2Q02817 5179 aa3.15□□□□□ -1.91
PCM1-201ENST00000325083 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
PCM1-201ENST00000325083 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
PCM1-201ENST00000325083 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
PCM1-201ENST00000325083 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
PCM1-201ENST00000325083 FCGBPQ9Y6R7 5405 aaPredicted RBP2.91□□□□□ -1.94
PCM1-201ENST00000325083 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
PCM1-201ENST00000325083 USH2AO75445 5202 aa2.85□□□□□ -1.95
PCM1-201ENST00000325083 KMT2DO14686 5537 aa2.75□□□□□ -1.97
PCM1-201ENST00000325083 MACF1Q9UPN3 7388 aaKnown RBP2.71□□□□□ -1.98
PCM1-201ENST00000325083 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
PCM1-201ENST00000325083 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
PCM1-201ENST00000325083 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
PCM1-201ENST00000325083 MUC12Q9UKN1 5478 aa2.6□□□□□ -1.99
PCM1-201ENST00000325083 NEBP20929 6669 aa2.57□□□□□ -2
PCM1-201ENST00000325083 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
PCM1-201ENST00000325083 MDN1Q9NU22 5596 aa2.5□□□□□ -2.01
PCM1-201ENST00000325083 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
PCM1-201ENST00000325083 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
PCM1-201ENST00000325083 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
PCM1-201ENST00000325083 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
PCM1-201ENST00000325083 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
PCM1-201ENST00000325083 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
PCM1-201ENST00000325083 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
PCM1-201ENST00000325083 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
PCM1-201ENST00000325083 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
PCM1-201ENST00000325083 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
PCM1-201ENST00000325083 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.11
PCM1-201ENST00000325083 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
PCM1-201ENST00000325083 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
PCM1-201ENST00000325083 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
PCM1-201ENST00000325083 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
PCM1-201ENST00000325083 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
PCM1-201ENST00000325083 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
PCM1-201ENST00000325083 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
PCM1-201ENST00000325083 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms