RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
NUP98-201ENST00000324932 MUC17Q685J3 4493 aa4.28□□□□□ -1.72
NUP98-201ENST00000324932 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
NUP98-201ENST00000324932 MT4P47944 62 aa4.25□□□□□ -1.73
NUP98-201ENST00000324932 MT1AP04731 61 aa4.25□□□□□ -1.73
NUP98-201ENST00000324932 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
NUP98-201ENST00000324932 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
NUP98-201ENST00000324932 KRTAP2-1Q9BYU5 128 aa4.23□□□□□ -1.73
NUP98-201ENST00000324932 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
NUP98-201ENST00000324932 KRTAP19-6Q3LI70 58 aa4.22□□□□□ -1.73
NUP98-201ENST00000324932 RNF213Q63HN8 5207 aa4.18□□□□□ -1.74
NUP98-201ENST00000324932 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.74
NUP98-201ENST00000324932 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
NUP98-201ENST00000324932 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
NUP98-201ENST00000324932 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
NUP98-201ENST00000324932 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
NUP98-201ENST00000324932 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
NUP98-201ENST00000324932 HMCN2Q8NDA2 5059 aa3.99□□□□□ -1.77
NUP98-201ENST00000324932 LPAP08519 4548 aa3.99□□□□□ -1.77
NUP98-201ENST00000324932 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
NUP98-201ENST00000324932 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.78
NUP98-201ENST00000324932 MUC2Q02817 5179 aa3.95□□□□□ -1.78
NUP98-201ENST00000324932 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.78
NUP98-201ENST00000324932 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
NUP98-201ENST00000324932 KRTAP9-2Q9BYQ4 174 aa3.87□□□□□ -1.79
NUP98-201ENST00000324932 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
NUP98-201ENST00000324932 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
NUP98-201ENST00000324932 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
NUP98-201ENST00000324932 LCE2AQ5TA79 106 aaPredicted RBP3.82□□□□□ -1.8
NUP98-201ENST00000324932 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
NUP98-201ENST00000324932 KRTAP20-1Q3LI63 56 aa3.76□□□□□ -1.81
NUP98-201ENST00000324932 USH2AO75445 5202 aa3.72□□□□□ -1.81
NUP98-201ENST00000324932 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
NUP98-201ENST00000324932 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
NUP98-201ENST00000324932 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
NUP98-201ENST00000324932 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
NUP98-201ENST00000324932 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
NUP98-201ENST00000324932 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
NUP98-201ENST00000324932 FCGBPQ9Y6R7 5405 aaPredicted RBP3.66□□□□□ -1.82
NUP98-201ENST00000324932 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
NUP98-201ENST00000324932 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
NUP98-201ENST00000324932 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
NUP98-201ENST00000324932 KMT2DO14686 5537 aa3.44□□□□□ -1.86
NUP98-201ENST00000324932 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
NUP98-201ENST00000324932 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
NUP98-201ENST00000324932 MDN1Q9NU22 5596 aa3.34□□□□□ -1.87
NUP98-201ENST00000324932 MUC12Q9UKN1 5478 aa3.33□□□□□ -1.88
NUP98-201ENST00000324932 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
NUP98-201ENST00000324932 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
NUP98-201ENST00000324932 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
NUP98-201ENST00000324932 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
NUP98-201ENST00000324932 NEBP20929 6669 aa3.07□□□□□ -1.92
NUP98-201ENST00000324932 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
NUP98-201ENST00000324932 KRTAP5-9P26371 169 aa3□□□□□ -1.93
NUP98-201ENST00000324932 KRTAP4-6Q9BYQ5 205 aa2.98□□□□□ -1.93
NUP98-201ENST00000324932 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
NUP98-201ENST00000324932 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
NUP98-201ENST00000324932 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
NUP98-201ENST00000324932 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
NUP98-201ENST00000324932 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
NUP98-201ENST00000324932 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
NUP98-201ENST00000324932 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
NUP98-201ENST00000324932 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
NUP98-201ENST00000324932 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
NUP98-201ENST00000324932 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
NUP98-201ENST00000324932 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
NUP98-201ENST00000324932 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.06
NUP98-201ENST00000324932 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
NUP98-201ENST00000324932 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
NUP98-201ENST00000324932 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
NUP98-201ENST00000324932 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
NUP98-201ENST00000324932 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
NUP98-201ENST00000324932 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
NUP98-201ENST00000324932 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
NUP98-201ENST00000324932 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
NUP98-201ENST00000324932 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
NUP98-201ENST00000324932 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 97.8 ms