RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 FAT4Q6V0I7 4981 aa4.24□□□□□ -1.73
CCDC149-201ENST00000324309 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
CCDC149-201ENST00000324309 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
CCDC149-201ENST00000324309 MT1MQ8N339 61 aa4.21□□□□□ -1.74
CCDC149-201ENST00000324309 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
CCDC149-201ENST00000324309 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.74
CCDC149-201ENST00000324309 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
CCDC149-201ENST00000324309 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
CCDC149-201ENST00000324309 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
CCDC149-201ENST00000324309 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
CCDC149-201ENST00000324309 MT3P25713 68 aa4.04□□□□□ -1.76
CCDC149-201ENST00000324309 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
CCDC149-201ENST00000324309 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
CCDC149-201ENST00000324309 UBR4Q5T4S7 5183 aa3.98□□□□□ -1.77
CCDC149-201ENST00000324309 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
CCDC149-201ENST00000324309 MT1AP04731 61 aa3.95□□□□□ -1.78
CCDC149-201ENST00000324309 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
CCDC149-201ENST00000324309 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
CCDC149-201ENST00000324309 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
CCDC149-201ENST00000324309 MT4P47944 62 aa3.9□□□□□ -1.79
CCDC149-201ENST00000324309 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
CCDC149-201ENST00000324309 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
CCDC149-201ENST00000324309 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
CCDC149-201ENST00000324309 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
CCDC149-201ENST00000324309 LOC100996750A0A140TA64 210 aa3.69□□□□□ -1.82
CCDC149-201ENST00000324309 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.83
CCDC149-201ENST00000324309 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
CCDC149-201ENST00000324309 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
CCDC149-201ENST00000324309 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
CCDC149-201ENST00000324309 USH2AO75445 5202 aa3.52□□□□□ -1.85
CCDC149-201ENST00000324309 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
CCDC149-201ENST00000324309 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
CCDC149-201ENST00000324309 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
CCDC149-201ENST00000324309 MUC2Q02817 5179 aa3.47□□□□□ -1.85
CCDC149-201ENST00000324309 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
CCDC149-201ENST00000324309 NEBP20929 6669 aa3.45□□□□□ -1.86
CCDC149-201ENST00000324309 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
CCDC149-201ENST00000324309 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
CCDC149-201ENST00000324309 PRM1P04553 51 aa3.33□□□□□ -1.88
CCDC149-201ENST00000324309 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
CCDC149-201ENST00000324309 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
CCDC149-201ENST00000324309 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
CCDC149-201ENST00000324309 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.89
CCDC149-201ENST00000324309 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
CCDC149-201ENST00000324309 KRTAP4-6Q9BYQ5 205 aa3.07□□□□□ -1.92
CCDC149-201ENST00000324309 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
CCDC149-201ENST00000324309 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
CCDC149-201ENST00000324309 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
CCDC149-201ENST00000324309 LCE1CQ5T751 118 aa2.96□□□□□ -1.93
CCDC149-201ENST00000324309 LCE1EQ5T753 118 aa2.96□□□□□ -1.93
CCDC149-201ENST00000324309 LCE1FQ5T754 118 aa2.96□□□□□ -1.93
CCDC149-201ENST00000324309 KMT2DO14686 5537 aa2.92□□□□□ -1.94
CCDC149-201ENST00000324309 MDN1Q9NU22 5596 aa2.91□□□□□ -1.94
CCDC149-201ENST00000324309 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
CCDC149-201ENST00000324309 KRTAP5-3Q6L8H2 238 aa2.79□□□□□ -1.96
CCDC149-201ENST00000324309 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
CCDC149-201ENST00000324309 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
CCDC149-201ENST00000324309 MUC12Q9UKN1 5478 aa2.72□□□□□ -1.97
CCDC149-201ENST00000324309 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
CCDC149-201ENST00000324309 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
CCDC149-201ENST00000324309 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
CCDC149-201ENST00000324309 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
CCDC149-201ENST00000324309 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
CCDC149-201ENST00000324309 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.02
CCDC149-201ENST00000324309 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.02
CCDC149-201ENST00000324309 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
CCDC149-201ENST00000324309 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
CCDC149-201ENST00000324309 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
CCDC149-201ENST00000324309 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
CCDC149-201ENST00000324309 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
CCDC149-201ENST00000324309 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
CCDC149-201ENST00000324309 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
CCDC149-201ENST00000324309 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
CCDC149-201ENST00000324309 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
CCDC149-201ENST00000324309 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
CCDC149-201ENST00000324309 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
CCDC149-201ENST00000324309 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
CCDC149-201ENST00000324309 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 135 ms