RNA–Protein interactions for RNA: ENST00000323871.9

PXN-203, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 5,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-203ENST00000323871 FLGP20930 4061 aaPredicted RBP5.41□□□□□ -1.54
PXN-203ENST00000323871 TNXBP22105 4242 aa5.4□□□□□ -1.54
PXN-203ENST00000323871 PRM1P04553 51 aa5.4□□□□□ -1.55
PXN-203ENST00000323871 EPPK1P58107 5090 aaKnown RBP5.39□□□□□ -1.55
PXN-203ENST00000323871 LPAP08519 4548 aa5.38□□□□□ -1.55
PXN-203ENST00000323871 KRTAP20-1Q3LI63 56 aa5.37□□□□□ -1.55
PXN-203ENST00000323871 MT1AP04731 61 aa5.3□□□□□ -1.56
PXN-203ENST00000323871 LCE1BQ5T7P3 118 aa5.28□□□□□ -1.56
PXN-203ENST00000323871 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
PXN-203ENST00000323871 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
PXN-203ENST00000323871 KRTAP6-3Q3LI67 103 aa5.25□□□□□ -1.57
PXN-203ENST00000323871 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
PXN-203ENST00000323871 ABCA13Q86UQ4 5058 aa5.24□□□□□ -1.57
PXN-203ENST00000323871 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
PXN-203ENST00000323871 KRTAP19-7Q3SYF9 63 aa5.22□□□□□ -1.57
PXN-203ENST00000323871 KRTAP9-7A8MTY7 169 aa5.22□□□□□ -1.57
PXN-203ENST00000323871 KRTAP2-3P0C7H8 128 aa5.16□□□□□ -1.58
PXN-203ENST00000323871 KRTAP2-4Q9BYR9 128 aa5.16□□□□□ -1.58
PXN-203ENST00000323871 RNF213Q63HN8 5207 aa5.1□□□□□ -1.59
PXN-203ENST00000323871 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.6
PXN-203ENST00000323871 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
PXN-203ENST00000323871 FAT4Q6V0I7 4981 aa5.03□□□□□ -1.6
PXN-203ENST00000323871 LCE5AQ5TCM9 118 aa5.03□□□□□ -1.6
PXN-203ENST00000323871 KRTAP9-1A8MXZ3 250 aaPredicted RBP5□□□□□ -1.61
PXN-203ENST00000323871 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
PXN-203ENST00000323871 SYNE1Q8NF91 8797 aaKnown RBP4.93□□□□□ -1.62
PXN-203ENST00000323871 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
PXN-203ENST00000323871 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
PXN-203ENST00000323871 SYNE2Q8WXH0 6885 aaKnown RBP4.86□□□□□ -1.63
PXN-203ENST00000323871 HMCN2Q8NDA2 5059 aa4.85□□□□□ -1.63
PXN-203ENST00000323871 UBR4Q5T4S7 5183 aa4.85□□□□□ -1.63
PXN-203ENST00000323871 KRTAP6-2Q3LI66 62 aa4.82□□□□□ -1.64
PXN-203ENST00000323871 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
PXN-203ENST00000323871 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
PXN-203ENST00000323871 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
PXN-203ENST00000323871 MUC2Q02817 5179 aa4.61□□□□□ -1.67
PXN-203ENST00000323871 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
PXN-203ENST00000323871 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
PXN-203ENST00000323871 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
PXN-203ENST00000323871 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
PXN-203ENST00000323871 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
PXN-203ENST00000323871 KRTAP5-9P26371 169 aa4.34□□□□□ -1.71
PXN-203ENST00000323871 NEBP20929 6669 aa4.22□□□□□ -1.73
PXN-203ENST00000323871 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
PXN-203ENST00000323871 USH2AO75445 5202 aa4.08□□□□□ -1.76
PXN-203ENST00000323871 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
PXN-203ENST00000323871 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
PXN-203ENST00000323871 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
PXN-203ENST00000323871 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
PXN-203ENST00000323871 DSTQ03001 7570 aaKnown RBP3.92□□□□□ -1.78
PXN-203ENST00000323871 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
PXN-203ENST00000323871 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
PXN-203ENST00000323871 KMT2DO14686 5537 aa3.83□□□□□ -1.8
PXN-203ENST00000323871 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
PXN-203ENST00000323871 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
PXN-203ENST00000323871 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
PXN-203ENST00000323871 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
PXN-203ENST00000323871 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
PXN-203ENST00000323871 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
PXN-203ENST00000323871 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
PXN-203ENST00000323871 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
PXN-203ENST00000323871 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.87
PXN-203ENST00000323871 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
PXN-203ENST00000323871 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
PXN-203ENST00000323871 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
PXN-203ENST00000323871 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
PXN-203ENST00000323871 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
PXN-203ENST00000323871 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
PXN-203ENST00000323871 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
PXN-203ENST00000323871 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
PXN-203ENST00000323871 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
PXN-203ENST00000323871 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
PXN-203ENST00000323871 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
PXN-203ENST00000323871 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
PXN-203ENST00000323871 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
PXN-203ENST00000323871 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
PXN-203ENST00000323871 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
PXN-203ENST00000323871 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 82.6 ms