RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 KMT2CQ8NEZ4 4911 aaKnown RBP2.82□□□□□ -1.96
SH3TC2-201ENST00000323829 BIRC6Q9NR09 4857 aa2.82□□□□□ -1.96
SH3TC2-201ENST00000323829 TNXBP22105 4242 aa2.8□□□□□ -1.96
SH3TC2-201ENST00000323829 MUC17Q685J3 4493 aa2.8□□□□□ -1.96
SH3TC2-201ENST00000323829 FSIP2Q5CZC0 6907 aa2.8□□□□□ -1.96
SH3TC2-201ENST00000323829 HERC1Q15751 4861 aa2.8□□□□□ -1.96
SH3TC2-201ENST00000323829 KRTAP9-7A8MTY7 169 aa2.76□□□□□ -1.97
SH3TC2-201ENST00000323829 HERC2O95714 4834 aa2.75□□□□□ -1.97
SH3TC2-201ENST00000323829 KRTAP4-7Q9BYR0 210 aa2.75□□□□□ -1.97
SH3TC2-201ENST00000323829 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
SH3TC2-201ENST00000323829 ABCA13Q86UQ4 5058 aa2.71□□□□□ -1.98
SH3TC2-201ENST00000323829 MT1LQ93083 61 aa2.7□□□□□ -1.98
SH3TC2-201ENST00000323829 LOC100996750A0A140TA64 210 aa2.69□□□□□ -1.98
SH3TC2-201ENST00000323829 PCLOQ9Y6V0 5065 aa2.69□□□□□ -1.98
SH3TC2-201ENST00000323829 MT1EP04732 61 aa2.69□□□□□ -1.98
SH3TC2-201ENST00000323829 SYNE1Q8NF91 8797 aaKnown RBP2.68□□□□□ -1.98
SH3TC2-201ENST00000323829 KRTAP2-3P0C7H8 128 aa2.68□□□□□ -1.98
SH3TC2-201ENST00000323829 KRTAP2-4Q9BYR9 128 aa2.68□□□□□ -1.98
SH3TC2-201ENST00000323829 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
SH3TC2-201ENST00000323829 SYNE2Q8WXH0 6885 aaKnown RBP2.65□□□□□ -1.98
SH3TC2-201ENST00000323829 MT1MQ8N339 61 aa2.64□□□□□ -1.99
SH3TC2-201ENST00000323829 KRTAP4-9Q9BYQ8 210 aa2.6□□□□□ -1.99
SH3TC2-201ENST00000323829 LCE2AQ5TA79 106 aaPredicted RBP2.59□□□□□ -2
SH3TC2-201ENST00000323829 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
SH3TC2-201ENST00000323829 EPPK1P58107 5090 aaKnown RBP2.57□□□□□ -2
SH3TC2-201ENST00000323829 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
SH3TC2-201ENST00000323829 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.57□□□□□ -2
SH3TC2-201ENST00000323829 RNF213Q63HN8 5207 aa2.56□□□□□ -2
SH3TC2-201ENST00000323829 HMCN2Q8NDA2 5059 aa2.56□□□□□ -2
SH3TC2-201ENST00000323829 KRTAP19-7Q3SYF9 63 aa2.55□□□□□ -2
SH3TC2-201ENST00000323829 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
SH3TC2-201ENST00000323829 UBR4Q5T4S7 5183 aa2.52□□□□□ -2.01
SH3TC2-201ENST00000323829 KRTAP2-2Q9BYT5 123 aa2.51□□□□□ -2.01
SH3TC2-201ENST00000323829 MT1AP04731 61 aa2.44□□□□□ -2.02
SH3TC2-201ENST00000323829 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
SH3TC2-201ENST00000323829 MUC2Q02817 5179 aa2.4□□□□□ -2.02
SH3TC2-201ENST00000323829 FAT4Q6V0I7 4981 aa2.39□□□□□ -2.03
SH3TC2-201ENST00000323829 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
SH3TC2-201ENST00000323829 DSTQ03001 7570 aaKnown RBP2.34□□□□□ -2.03
SH3TC2-201ENST00000323829 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.04
SH3TC2-201ENST00000323829 KRTAP9-9Q9BYP9 154 aa2.33□□□□□ -2.04
SH3TC2-201ENST00000323829 KRTAP9-4Q9BYQ2 154 aa2.29□□□□□ -2.04
SH3TC2-201ENST00000323829 FCGBPQ9Y6R7 5405 aaPredicted RBP2.27□□□□□ -2.05
SH3TC2-201ENST00000323829 MACF1Q9UPN3 7388 aaKnown RBP2.27□□□□□ -2.05
SH3TC2-201ENST00000323829 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
SH3TC2-201ENST00000323829 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
SH3TC2-201ENST00000323829 USH2AO75445 5202 aa2.2□□□□□ -2.06
SH3TC2-201ENST00000323829 KMT2DO14686 5537 aa2.18□□□□□ -2.06
SH3TC2-201ENST00000323829 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
SH3TC2-201ENST00000323829 KRTAP4-6Q9BYQ5 205 aa2.1□□□□□ -2.07
SH3TC2-201ENST00000323829 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
SH3TC2-201ENST00000323829 KRTAP4-2Q9BYR5 136 aa2.07□□□□□ -2.08
SH3TC2-201ENST00000323829 SSPOA2VEC9 5147 aa2.05□□□□□ -2.08
SH3TC2-201ENST00000323829 KRTAP5-9P26371 169 aa1.99□□□□□ -2.09
SH3TC2-201ENST00000323829 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
SH3TC2-201ENST00000323829 NEBP20929 6669 aa1.98□□□□□ -2.09
SH3TC2-201ENST00000323829 MUC12Q9UKN1 5478 aa1.98□□□□□ -2.09
SH3TC2-201ENST00000323829 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
SH3TC2-201ENST00000323829 MDN1Q9NU22 5596 aa1.86□□□□□ -2.11
SH3TC2-201ENST00000323829 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
SH3TC2-201ENST00000323829 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
SH3TC2-201ENST00000323829 KRTAP5-3Q6L8H2 238 aa1.68□□□□□ -2.14
SH3TC2-201ENST00000323829 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
SH3TC2-201ENST00000323829 KRTAP5-8O75690 187 aa1.52□□□□□ -2.17
SH3TC2-201ENST00000323829 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
SH3TC2-201ENST00000323829 MUC5ACP98088 5654 aa1.51□□□□□ -2.17
SH3TC2-201ENST00000323829 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
SH3TC2-201ENST00000323829 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
SH3TC2-201ENST00000323829 KRTAP5-2Q701N4 177 aa1.37□□□□□ -2.19
SH3TC2-201ENST00000323829 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
SH3TC2-201ENST00000323829 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
SH3TC2-201ENST00000323829 KRTAP5-1Q6L8H4 278 aa1.26□□□□□ -2.21
SH3TC2-201ENST00000323829 KRTAP21-2Q3LI59 83 aa1.24□□□□□ -2.21
SH3TC2-201ENST00000323829 MUC5BQ9HC84 5762 aaPredicted RBP1.2□□□□□ -2.22
SH3TC2-201ENST00000323829 KRTAP5-11Q6L8G4 156 aa1.19□□□□□ -2.22
SH3TC2-201ENST00000323829 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.17□□□□□ -2.22
SH3TC2-201ENST00000323829 KRTAP5-7Q6L8G8 165 aa1.15□□□□□ -2.22
SH3TC2-201ENST00000323829 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 73.4 ms